PubMed Health⌕ Search

SEARCH · PubMed Health

Results for “Phase Transition”

Explore indexed PubMed citations for clinical trials, systematic reviews and public health research. Read source abstracts and follow each citation to its original PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,351 records · Page 75Linked to original sources

Application of ultrahigh vacuum reflection electron microscopy for the study of clean silicon surfaces in sublimation, epitaxy, and phase transitions.

The construction and performance of an ultrahigh vacuum reflection electron microscope (UHV REM) on the base of a transmission electron microscope with top entry stage are described. Some results of in situ study of structural transformations on clean silicon surfaces during sublimation, surface phase transitions, and initial stages of epitaxial growth are shown.

Crystallization↗

Phase transitions and symmetry breaking in singular diffusion.

The long-time asymptotics are determined for fast nonlinear diffusion by linearizing Otto's gradient descent model at the Barenblatt profile. The spectrum of the entropy is explicitly determined. The dynamics are found to undergo a phase transition in which rotational symmetry is broken as the strength of the nonlinearity is varied.

Journal Article↗

Discrete time model for chemical or biological decay in chaotic flows: reentrance phase transitions.

We consider a discrete time model of advection, reaction, and diffusion on a lattice to investigate the steady-state spatial structure of chemically decaying substances. The time discretization of the dynamics has a considerable impact on these structures. Additional smooth-filamental phase transitions, nonexistent in the continuous-time description, appear. We show how these structures and their scaling properties depend on the time step of the discrete dynamics. Exploiting the analogies of this discrete model with the logistic map, some general features are discussed.

Journal Article↗

Kinetics of a phase transition in a frozen solution.

The increased use of lyophilization in the preservation of biologicals, foods, and pharmaceuticals has revealed problems of discoloration, meltback, puffing, and collapse, which can result in unacceptable products. Literature reports suggest that some of these problems are related to phase transitions occurring in the frozen solutions. This paper describes the crystallization of mannitol and cefazolin sodium in frozen solution. Data were collected using calorimetric methods in both an isothermal and non-isothermal mode. Analysis of cefazolin sodium data, using the Johnson-Mehl-Avrami equation, indicated that there was a mechanism of heterogeneous nucleation of a two dimensional growth habit. Mannitol data indicated that the controlling crystallization mechanism was not constant over the temperature range studied.

Calorimetry, Differential Scanning↗

Antifreeze glycoproteins inhibit leakage from liposomes during thermotropic phase transitions.

Antifreeze glycoproteins (AFGPs), found in the blood of polar fish at concentrations as high as 35 g/liter, are known to prevent ice crystal growth and depress the freezing temperature of the blood. Previously, Rubinsky et al. [Rubinsky, B., Mattioli, M., Arav, A., Barboni, B. & Fletcher, G. L. (1992) Am. J. Physiol. 262, R542-R545] provided evidence that AFGPs block ion fluxes across membranes during cooling, an effect that they ascribed to interactions with ion channels. We investigated the effects of AFGPs on the leakage of a trapped marker from liposomes during chilling. As these liposomes are cooled through the transition temperature, they leak approximately 50% of their contents. Addition of less than 1 mg/ml of AFGP prevents up to 100% of this leakage, both during chilling and warming through the phase transition. This is a general effect that we show here applies to liposomes composed of phospholipids with transition temperatures ranging from 12 degrees C to 41 degrees C. Because these results were obtained with liposomes composed of phospholipids alone, we conclude that the stabilizing effects of AFGPs on intact cells during chilling reported by Rubinsky et al. may be due to a nonspecific effect on the lipid components of native membranes. There are other proteins that prevent leakage, but only under specialized conditions. For instance, antifreeze proteins, bovine serum albumin, and ovomucoid all either have no effect or actually induce leakage. Following precipitation with acetone, all three proteins inhibited leakage, although not to the extent seen with AFGPs. Alternatively, there are proteins such as ovotransferrin that have no effect on leakage, either before or after acetone precipitation.

Animals↗

A reinterpretation of Na channel gating and permeation in terms of a phase transition between a transmembrane S4 alpha-helix and a channel-helix. A theoretical study.

A functional model for the S4/IV alpha-helix of the action potential sodium channel is described by means of a thermodynamic approach. The model is based on a phase transition between the alpha-helix and an ion conducting channel-helix which is similar to the well established helix-coil transition in solution. The right hand channel-helix is a peptide chain with an alternating sequence of torsional angles (phi1, psi1) = (87 degrees, 315 degrees) and (phi2, psi2) = (22 degrees, 107 degrees) which yields a helix of 13.5 A per turn. The axial dipole moments of the peptide bonds of this chain of L-amino acids nearly cancel each other out in a similar way to those in the gramicidin A channel, which is formed by alternating D- and L-amino acids. The helix, which does not contain any H-bonds, is stabilized by a helical file of water molecules which includes the permeating ion(s). This file turns around the channel-helix to form a relatively stable "double helix" structure which corresponds to the open channel. Since every third side chain in the S4/IV helix carries a positive charge their environments must be polarized. These polarized regions form a left hand screening-helix around the alpha-helix with 27 A per turn. If all H-bonds of the alpha-helix are broken and the internal alpha-carbon atom is considered as fixed, the outer ten residues leave the membrane while the internal ten residues form the channel-helix. In this configuration every positively charged side chain matches nearly exactly every second polarized region of the screening-helix leaving the three regions in-between exposed to the water file containing the ion(s). This further stabilizes the channel and agrees nicely with the idea of cationic selectivity. An analysis of the energetics of the alpha-helix-channel-helix transition showed that the voltage-independent part of the free energy per helix residue could well be close to 0 kcal/mol and thus be in the range where a transition could occur. Two voltage-dependent contributions were included: the break down of the considerable dipole of the alpha-helix and the outward shift of the positive charges of the side chains upon channel-helix formation. Taking into account the fact that the formation of an alpha-helix is a highly cooperative process the degree of voltage dependence of the probability of formation of a channel-helix proved to be in the same range as experimental values for the open probability of modified Na channels whose inactivation had been removed. With regard to gating currents, the model predicts that 2.74 positive charges are moved in an outward direction. Consequences of the model for other experimental findings are discussed.

Amino Acids↗

Raman and infrared study of the crystals with molecular anions in the region of a solid-liquid phase transition.

It is presented the Raman and infrared (IR) spectroscopic investigations of the thiocyanates: LiSCN, NaSCN, KSCN, RbSCN, CsSCN; nitrates: Ca(NO3)2, Sr(NO3)2, Ba(NO3)2, Pb(NO3)2; and perrhenates: LiReO4, NaReO4, KReO4 in the region of a solid-liquid phase transition. The differences in a pre-melting behavior of this salts were found which can be attributed to a different geometry of the SCN-, NO3- and ReO4- anions.

Crystallization↗

Aerosolization of low phase transition temperature liposomal tobramycin as a dry powder in an animal model of chronic pulmonary infection caused by Pseudomonas aeruginosa.

Eradication of mucoid Pseudomonas aeruginosa in an animal model of chronic pulmonary infection has been previously demonstrated following the intratracheal administration of Fluidosomes, a low phase transition temperature (low T(C)) liposomal tobramycin preparation administered in liquid form (Beaulac et al., Antimicrob. Agents Chemother., 40, 665-669, 1996). In the present work, the same liposomal formulation was administered as a dry powder aerosol to an animal model of chronic pulmonary infection in view of a possible clinical development in cystic fibrosis patients. Chronic infection was established by intratracheal administration of 10(5) cfu of a mucoid variant of P. aeruginosa, PA 508, prepared in agar beads. Sixteen hours after one aerosol treatment, the cfu counts performed on lungs (pair) treated with liposomal tobramycin were of 4.31x10(5) cfu/lungs comparatively to 1.32x10(8) and 3.02x10(8) cfu/lungs respectively in untreated and in lungs treated with free antibiotic. Considering the quantity of liposome-tobramycin that has reached the lungs, the results suggest that aerosolization of low T(C) liposomal tobramycin used as a dry powder preparation could be an effective way of treating chronic pulmonary infection caused by Pseudomonas.

Aerosols↗

Reversible phase transitions in Na2S under pressure: a comparison with the cation array in Na2SO4.

The structural behavior of the antifluorite Na(2)S, disodium sulfide, has been studied under pressure up to 22 GPa by in situ synchrotron X-ray diffraction experiments in a diamond anvil cell at room temperature. At approximately 7 GPa, Na(2)S undergoes a first phase transition to the orthorhombic anticotunnite (PbCl(2)) structure (Pnma, Z = 4). The lattice parameters at 8.2 GPa are a = 6.707 (5), b = 4.120 (3), c = 8.025 (4) A. At approximately 16 GPa, Na(2)S undergoes a second transition adopting the structure of the Ni(2)In-type (P6(3)/mmc, Z = 2). The lattice parameters at 16.6 GPa are a = 4.376 (18), c = 5.856 (9) A. Both pressure-induced phases have been confirmed by full Rietveld refinements. An inspection of the cation array of Na(2)SO(4) reveals that its Na(2)S subarray is also of the Ni(2)In-type. This feature represents a new example of how the cation arrangements in ternary oxides correspond to the topology of the respective binary compounds. We discuss analogies between the insertion of oxygen and the application of pressure.

Journal Article↗

NMR and calorimetric studies of changes in phase transition of head group modified phospholipids.

The 13C- and 31P-NMR spectra and DSC thermograms of unsonicated dispersions consisting of phospholipids of varying methylation stages of the propanolamine head group were investigated. Methylation of the head group was accompanied by a corresponding reduction in the phase transition temperatures. In the liquid crystalline state the 31P-anisotropy of the chemical shift is about equal for all studied compounds, demonstrating that the motion of the phosphate group is not influenced by modifications of the propanolamine group.

Calorimetry↗

Valence instabilities, phase transitions, and abrupt lattice expansion at 5 K in the YbGaGe system.

The powder synchrotron X-ray diffraction technique was used to study the thermal expansion behavior of the mixed valence layered compound, YbGa1.05Ge0.95 in the temperature range 3-1123 K. A surprising abrupt isosymmetric phase transition, accompanied by a dramatic volume increase (negative thermal expansion), was found at 5 K induced by a sudden Yb valence transition from +(2 + epsilon) toward +2. At high temperatures, the material undergoes a transformation to a highly disordered structure until it eventually collapses at 1123 K to a structure with isovalent Yb ions and flat Ga/Ge planes (AlB2 type).

Journal Article↗

Complex light: dynamic phase transitions of a light beam in a nonlinear nonlocal disordered medium.

The dynamics of several light filaments (spatial optical solitons) propagating in an optically nonlinear and nonlocal random medium is investigated using the paradigms of the physics of complexity. Cluster formation is interpreted as a dynamic phase transition. A connection with the random matrices approach for explaining the vibrational spectra of an ensemble of solitons is pointed out. General arguments based on a Brownian dynamics model are validated by the numerical simulation of a stochastic partial differential equation system. The results are also relevant for Bose condensed gases and plasma physics.

Journal Article↗

Near-surface structural phase transition of SrTiO3 studied with zero-field beta-detected nuclear spin relaxation and resonance.

We demonstrate that zero-field beta-detected nuclear quadrupole resonance and spin relaxation of low energy (8)Li can be used as a sensitive local probe of structural phase transitions near a surface. We find that the transition near the surface of a SrTiO(3) single crystal occurs at T(c) approximately 150K, i.e., approximately 45K higher than T(c)bulk, and that the tetragonal domains formed below T(c) are randomly oriented.

Journal Article↗

Soft x-ray spectroscopy of Ba24Ge100: electronic phase transition and Ba-atom rattling.

The electronic states of Ba24Ge100 are studied by soft x-ray photoelectron spectroscopy (XPS) at a high-energy photon factory. A large reduction in the density of states (DOS) at the Fermi level is clearly shown before and after the electronic phase transition at 200 K. The changes in the spectrum widths and the fine structures of the core-level Ba 4d spectra give a very reasonable indication of the Ba-atom rattlings in the clathrate polyhedra. On-resonance experiments using the excitation from Ba 3d to 4f levels display that the wave functions of Ba 5d and 6s orbitals give only a small contribution to make a Fermi surface through the hybridization with the Ge20 cluster orbitals. Importantly, reliable values of the DOS at the Fermi level NEF are successfully deduced, using two data sets of DOS obtained from high-resolution XPS and the total magnetic susceptibilities by a superconducting quantum interference device, to be 0.149 and 0.0427 states eV(-1) (Ge atom)(-1) for a high-temperature and for a low-temperature phase.

Journal Article↗

Metamagnetic phase transition of the antiferromagnetic Heisenberg icosahedron.

The observation of hysteresis effects in single molecule magnets like Mn12-acetate has initiated ideas of future applications in storage technology. The appearance of a hysteresis loop in such compounds is an outcome of their magnetic anisotropy. In this Letter we report that magnetic hysteresis occurs in a spin system without any anisotropy, specifically where spins mounted on the vertices of an icosahedron are coupled by antiferromagnetic isotropic nearest-neighbor Heisenberg interaction giving rise to geometric frustration. At T = 0 this system undergoes a first-order metamagnetic phase transition at a critical field Bc between two distinct families of ground state configurations. The metastable phase of the system is characterized by a temperature and field dependent survival probability distribution.

Journal Article↗

Absence of magnetic order in Yb3Ga5O12: relation between phase transition and entropy in geometrically frustrated materials.

From muon spin relaxation spectroscopy experiments, we show that the sharp peak (lambda-type anomaly) detected by specific heat measurements at 54 mK for the ytterbium gallium garnet compound, Yb3Ga5O12, does not correspond to the onset of a magnetic phase transition, but to a pronounced building up of dynamical magnetic pair correlations. Beside the lambda anomaly, a broad hump is observed at higher temperature in the specific heat of this garnet and other geometrically frustrated compounds. Comparing with other frustrated magnetic systems we infer that a ground state with long-range order is reached only when at least 1/4-1/3 of the magnetic entropy is released at the lambda transition.

Journal Article↗

Interface depinning versus absorbing-state phase transitions.

According to recent numerical results from lattice models, the critical exponents of systems with many absorbing states and order parameter coupled to a nondiffusive conserved field coincide with those of the linear interface depinning model within computational accuracy. In this paper the connection between absorbing-state phase transitions and interface pinning in quenched disordered media is investigated. For that, we present an heuristic mapping of the interface dynamics in a disordered medium into a Langevin equation for the active-site density and show that a Reggeon-field-theory-like description, in which the order parameter appears coupled to an additional nondiffusive conserved field, emerges rather naturally. Reciprocally, we construct a mapping from a discrete model belonging in the absorbing state with a conserved-field class to a discrete interface equation, and show how a quenched disorder, typical of the interface representation is originated. We discuss the character of the possible noise terms in both representations, and overview the critical exponent relations. Evidence is provided that, at least for dimensions larger that one, both universality classes are just two different representations of the same underlying physics.

Journal Article↗