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Nucleotide-dependent dimerization of the C-terminal domain of the ABC transporter CvaB in colicin V secretion.

The cytoplasmic membrane proteins CvaB and CvaA and the outer membrane protein TolC constitute the bacteriocin colicin V secretion system in Escherichia coli. CvaB functions as an ATP-binding cassette transporter, and its C-terminal domain (CTD) contains typical motifs for the nucleotide-binding and Walker A and B sites and the ABC signature motif. To study the role of the CvaB CTD in the secretion of colicin V, a truncated construct of this domain was made and overexpressed. Different forms of the CvaB CTD were found during purification and identified as monomer, dimer, and oligomer forms by gel filtration and protein cross-linking. Nucleotide binding was shown to be critical for CvaB CTD dimerization. Oligomers could be converted to dimers by nucleotide triphosphate-Mg, and nucleotide release from dimers resulted in transient formation of monomers, followed by oligomerization and aggregation. Site-directed mutagenesis showed that the ABC signature motif was involved in the nucleotide-dependent dimerization. The spatial proximity of the Walker A site and the signature motif was shown by disulfide cross-linking a mixture of the A530C and L630C mutant proteins, while the A530C or L630C mutant protein did not dimerize on its own. Taken together, these results indicate that the CvaB CTD formed a nucleotide-dependent head-to-tail dimer.

ATP-Binding Cassette Transporters↗

Contrast dependence of perceptual grouping in brain-damaged patients with visual extinction.

Extinction is manifested in conditions of bilateral simultaneous stimulation, as a failure to detect the stimulus contra-lateral to the side of a cerebral lesion, while the same stimulus is correctly detected there when presented in isolation. The phenomenon is usually interpreted in terms of impaired mobilization of attention from an attended to an unattended object. We have recently shown, using pairs of Gabor patches as stimuli, that pair detection is maximally improved in conditions where the two stimuli presented simultaneously to the two halves of the visual field are co-oriented and co-axial and their location is not too eccentric. Here we add new information by showing that contrast isotropy of the stimulus pair is important in producing this orientation-similarity gain. The further advantage of co-oriented co-linear stimuli over co-oriented parallel (vertical) stimuli was shown exclusively with iso-contrast stimulus pairs, and was significantly enhanced when the contrast level of the stimulus pair was low. Stimulus properties producing reduced extinction seem to correlate with the selectivity pattern and contrast dependence of (a) spatial lateral facilitation observed in psychophysical studies with normal observers, and (b) long-range interactions observed in the primary visual cortex. Thus, two remote visual stimuli seem to be processed as a single object when the corresponding neuronal activities are linked via long-range lateral interactions. The present demonstration of contrast dependency in such processing, strengthens our previous conjecture that even in the presence of significant, extinction producing, parietal damage, the primary visual cortex preserves the capacity to encode, using long-range lateral interactions, an image description in which visual objects are already segregated from background.

Aged↗

A targeted contrast agent for magnetic resonance imaging of thrombus: implications of spatial resolution.

A preparation of ultra-small superparamagnetic iron oxide (USPIO) particles coupled to an RGD peptide (RGD-USPIO) was investigated as an MR contrast agent, targeted to activated platelets, in both ex vivo and in vivo thrombus models. Thrombus visualization ex vivo was compared using RGD-USPIO and a non-targeted UPSIO. The influence of thrombus visualization on thrombus exposure time to RGD-USPIO (ex vivo) and on the spatial resolution of the MR image (ex vivo and in vivo) was assessed. RGD-USPIO resulted in better thrombus visualization than non-targeted USPIO ex vivo, and maximum enhancement was achieved after approximately one hour exposure time of the thrombus to RGD-USPIO. The ability to visualize the clots was highly dependent on the spatial resolution of the image. In vivo, an in-plane resolution of less than 0.2 x 0.2 mm(2) was required for good clot visualization after contrast enhancement. It is concluded that the achievable resolution and sensitivity is a potential limitation to the usefulness of active vascular targeting in MRI.

Animals↗

The effects of antiepileptic drugs on spatial learning and hippocampal protein kinase C gamma in immature rats.

This study was conducted to determine if alterations in hippocampal protein kinase C (PKC) gamma is one of the cellular mechanisms by which conventional antiepileptic drugs affect learning and memory. Wistar Rats (21-day-old) were divided into five groups: (1) control (no training and drugs); (2) training group (no drugs); (3) phenobarbital (PB) group; (4) carbamazepine (CBZ) group; and (5) valproate (VPA) group. A hippocampus dependent learning task (spatial changing learning) was used in the latter four groups lasting a total of 10 days. Correct responding rate of training group was significantly higher (P < 0.05) than in the PB, CBZ and VPA group. The PKC gamma staining intensity in hippocampal CA1-2 region of training group was significant greater than that of the control and PB group. There was no difference in staining intensities between the CBZ, VPA group or training group. The amount of PKC gamma located in plasma membrane of hippocampal neurons was significantly higher in the training group (P < 0.05) than the control, PB and VPA groups. No differences were found between the training and CBZ group. Lastly, the amount of PKC gamma in cytosol of hippocampus did not significantly differ between any of the five groups. These results indicate that the three antiepileptic drugs used in this study all disturbed the spatial learning of immature rats. Spatial learning was concomitant with activation of PKC gamma in hippocampal neurons. PB and VPA likely adversely affect learning and memory by interfering with PKC gamma activation, whereas CBZ may act by a different mechanism, possibly in the post-translocation process or by a PKC gamma independent pathway.

Animals↗

Effects of ventral hippocampal galanin on spatial learning and on in vivo acetylcholine release in the rat.

The neuropeptide galanin coexists in the medial septum and diagonal band of Broca with a population of acetylcholine neurons which project mainly to the ventral hippocampus. The present studies investigated the role of ventral hippocampal galanin in spatial learning in the male rat using a spatial learning task. In addition, the effects of galanin on cholinergic function were monitored by in vivo microdialysis and high-performance liquid chromatography. Bilateral microinjections of galanin (3 nmol/ rat) via chronic cannulae placed into the ventral hippocampus (i.v.h.) produced a slight but significant impairment of acquisition of the spatial task, while the 1 nmol dose of galanin facilitated acquisition. The 6 nmol dose of galanin failed to affect performance. A trend for an impairment of long-term memory retention (examined seven days after the last training session) was observed after 3 nmol of galanin, while the 1 nmol dose facilitated retention performance. Scopolamine (0.1 mg/kg, s.c.) caused a marked impairment of acquisition. Galanin (3 nmol/rat) given i.v.h. failed to modify the acquisition impairment caused by scopolamine (0.1 mg/kg, s.c.). These results suggest that galanin given i.v.h. produces a biphasic dose-dependent effects on spatial learning. In freely moving rats, galanin (3 nmol/10 microliters) given into the lateral ventricle (i.c.v.) did not affect basal acetylcholine release. In contrast, perfusion (100 min) with galanin (0.1 or 0.3 nmol/1.25 microliters/min) through the ventral hippocampal probe resulted in a reduction of basal acetycholine release which was dose-dependent and reversible. Galanin given i.c.v. (3 nmol/10 microliters) or through the probe (0.3 nmol/1.25 microliters/min) attenuated the increase in acetylcholine release evoked by the muscarinic antagonist scopolamine (0.1 mg/kg, s.c.; 0.001 nmol/1.25 microliters/min through the probe). The galanin plus scopolamine combinations produced a 50% lower increase in the extracellular acetylcholine concentrations than scopolamine alone. This suggests that the mechanism(s) behind scopolamine- and galanin-induced stimulation of acetylcholine differ. These results indicate that ventral hippocampal galanin plays a role in cognition and that it has a powerful and modulatory effect on cholinergic transmission. However, the effects of exogenous galanin on spatial learning cannot be directly related to changes in in vivo cholinergic transmission in the ventral hippocampus. These discrepancies may relate to effects on subtypes of galanin receptors with different functional coupling. In addition, other hippocampal neurotransmitter systems (e.g. noradrenergic neurons) important for cognitive functions may also be modulated by ventral hippocampal galanin.

Acetylcholine↗

Impact of the microscale distribution of a Pseudomonas strain introduced into soil on potential contacts with indigenous bacteria.

Soil bioaugmentation is a promising approach in soil bioremediation and agriculture. Nevertheless, our knowledge of the fate and activity of introduced bacteria in soil and thus of their impact on the soil environment is still limited. The microscale spatial distribution of introduced bacteria has rarely been studied, although it determines the encounter probability between introduced cells and any components of the soil ecosystem and thus plays a role in the ecology of introduced bacteria. For example, conjugal gene transfer from introduced bacteria to indigenous bacteria requires cell-to-cell contact, the probability of which depends on their spatial distribution. To quantitatively characterize the microscale distribution of an introduced bacterial population and its dynamics, a gfp-tagged derivative of Pseudomonas putida KT2440 was introduced by percolation in repacked soil columns. Initially, the introduced population was less widely spread at the microscale level than two model indigenous functional communities: the 2,4-dichlorophenoxyacetic acid degraders and the nitrifiers (each at 10(6) CFU g(-1) soil). When the soil was percolated with a substrate metabolizable by P. putida or incubated for 1 month, the microscale distribution of introduced bacteria was modified towards a more widely dispersed distribution. The quantitative data indicate that the microscale spatial distribution of an introduced strain may strongly limit its contacts with the members of an indigenous bacterial community. This could constitute an explanation to the low number of indigenous transconjugants found most of time when a plasmid-donor strain is introduced into soil.

Agriculture↗

Spatially weighted BOLD signal for comparison of functional magnetic resonance imaging and near-infrared imaging of the brain.

We introduce a weighted spatial average of the functional magnetic resonance imaging (fMRI) BOLD signal (blood oxygen level-dependent) that is appropriate for comparison with the changes in oxy- and deoxy-hemoglobin concentrations measured with near-infrared spectroscopy (NIRS) during brain activation. Because the BOLD signal shows a spatial dependence (both in shape and amplitude) within the region of activation, the location of the optical probe with respect to the region of BOLD activation should be taken into account for comparison of the BOLD and NIRS signals. Our new method is based on combining weighted contributions of the BOLD signal from each activated voxel, with a weight given by a hitting density function for photons migrating between a given pair of illumination and collection points. We present a case study where we have found that the new spatially weighted BOLD signal shows a high spatial and temporal correlation with the oxy- and deoxy-hemoglobin concentration changes measured with NIRS during a hand-tapping protocol. These findings reinforce the idea that fMRI and NIRS are sensitive to similar underlying hemodynamic changes, and indicate that the proposed weighted BOLD signal is needed for a quantitative comparison of BOLD and NIRS signals.

Brain↗

Suppression of contrast sensitivity during eyelid blinks.

Each blink of the eyelids is associated with a concurrent suppression of vision that lasts as long as 200 msec. Saccadic eye movements are also associated with a concurrent suppression of vision. Previous studies suggested that blink and saccadic suppression may be the result of a single mechanism. Volkmann, Riggs, White and Moore [(1978) Vision Research, 18, 1193-1199] demonstrated that saccadic suppression is most evident for low spatial frequency stimuli. However, the effect of stimulus spatial frequency on blink suppression has not been evaluated. If blink suppression and saccadic suppression result from a single mechanism, then blink suppression should also exhibit its greatest effect at low spatial frequencies. The purpose of this study was to determine the effect of stimulus spatial frequency on blink suppression. The stimulus was a sine-wave grating presented at different times after the blink. Psychometric functions were produced from the data for each post-blink, stimulus onset time and a Weibull function was fit to the data to determine threshold. The magnitude and duration of blink induced contrast sensitivity suppression was found to depend on the spatial frequency of the stimulus employed (similar to saccadic suppression). This is further evidence that a single mechanism may produce both blink induced visual suppression and saccadic suppression.

Blinking↗

Effect of orientation on spatiotemporal contrast sensitivity in multiple sclerosis.

Spatiotemporal contrast sensitivity at three orientations, vertical, horizontal and oblique, was studied in 18 patients with clinically definite and laboratory-confirmed definite multiple sclerosis (MS). Nineteen age-matched control subjects were also studied under identical experimental conditions. Contrast thresholds for detecting steady and counterphase modulated (5 Hz) gratings ranging in spatial frequency from 0.5 to 12 c/deg were measured by a modified psychophysical method of limits. With the exception of two patients (three eyes) whose Snellen acuity scores were 20/70, all observers had acuity scores of 20/30 or better. All subjects were corrected for astigmatism. Orientation, spatial frequency and temporal frequency interacted differently in determining contrast sensitivity in the two groups of observers. For the controls, an oblique effect was present for both the steady and counterphase modulated gratings of high spatial frequencies, and there was no orientation-dependent loss of sensitivity for low spatial frequencies. For the observers with MS, there was no oblique effect, but sensitivity was dependent on orientation for the low spatial frequencies. Most patients with MS had reduced contrast sensitivity, compared to the controls, at one or more orientations. Counterphase modulation increased sensitivity to the low spatial frequencies and decreased sensitivity to the high spatial frequencies for both normal controls and patients with MS. In patients with MS this effect of temporal modulation on contrast sensitivity was markedly enhanced.

Adult↗

Motion discrimination in two-frame sequences with differing spatial frequency content.

We measured the upper threshold for directional motion discrimination (Dmax) in two-frame random binary luminance patterns (random dot kinematograms) in which either one or both frames was spatially low-pass filtered by convolution with a Gaussian filter. When both frames were low-pass filtered, Dmax increased as a function of the standard deviation of the Gaussian blurring function, in agreement with previous findings. However, when only one of the two frames was blurred, Dmax showed little change with blurring space constants below about 20 min arc, and at larger space constants motion discrimination became impossible. We take this as evidence against the proposal that Dmax is preferentially determined by motion signals from high spatial frequencies; and as evidence for the alternative that Dmax depends upon the mean spatial interval between features in the pattern after a single stage of spatial frequency pre-filtering. The breakdown in motion discrimination for space constants above about 20 min arc can be predicted from the computed effects of blurring upon the correlation between features (zero-bounded regions) in the broad-band and spatially filtered patterns. At values of blur where motion discrimination began to collapse there was a temporal order asymmetry; discrimination was easier when the low-pass pattern preceded the broadband pattern than when the broadband pattern appeared first. We propose that the temporally sustained high spatial frequency signal in the broadband pattern is delayed relative to the more transient low frequency signal; or alternatively, that the inhibitory surround of the spatial prefilter is switched in after a delay relative to the excitatory centre. The processing-delay interpretation was tested and confirmed in a second experiment by manipulating the frame duration.

Discrimination, Psychological↗

The attentional selection of spatial and non-spatial attributes in touch: ERP evidence for parallel and independent processes.

To investigate the functional relationship between spatial and non-spatial attentional selectivity in somatosensory processing, event-related potentials (ERPs) were recorded to mechanical tactile stimuli, which were delivered to the right or left hand, and were low or high in frequency (Experiment 1), or soft or strong in intensity (Experiment 2). Participants' task was to attend to a specific combination of one stimulus location and one non-spatial attribute. Spatial attention was reflected in enhanced N140 components followed by a sustained attentional negativity. ERP effects of non-spatial attention (enhanced negativities to the attended frequency or intensity) were observed in the same latency range, suggesting that the attentional selection of relevant spatial and non-spatial attributes occurs in parallel. Most importantly, ERP correlates of attention directed to stimulus frequency and intensity were unaffected by the current focus of spatial attention. In contrast to vision, where the selective processing of non-spatial attributes is hierarchically dependent on selection by location, but similar to auditory attention, spatial and non-spatial attentional selectivity appear to operate independently in touch.

Adult↗

Non-regularly shaped plasmon resonant nanoparticle as localized light source for near-field microscopy.

We study numerically two-dimensional nanoparticles with a non-regular shape and demonstrate that these particles can support many more plasmon resonances than a particle with a regular shape (e.g. an ellipse). The electric field distributions associated with these different resonances are investigated in detail in the context of near-field microscopy. Depending on the particle shape, extremely strong and localized near-fields, with intensity larger than 105 that of the illumination wave, can be generated. We also discuss the spectral dependence of these near-fields and show that different spatial distributions are observed, depending which plasmon resonance is excited in the particle.

Journal Article↗

Understanding the process of quantitative ultrasonic tissue characterization.

Because the human vision system cannot distinguish the broad range of gray values that a computer visual system can, computerized image analysis may be used to obtain quantitative information from ultrasonographic (US) real-time B-mode scans. Most quantitative US involves programming an off-line computer to accept, analyze, and display US image data in a way that enhances the detection of changes in small-scale structures and blood flow that occur with disease. Common image textural features used in quantitative US tissue characterization consist of first-order gray-level statistics (eg, occurrence frequency of gray levels independent of location or spatial relationship) and second-order gray-level statistics dependent on location and spatial relationship, including statistical analysis of gradient distribution, co-occurrence matrix, covariance matrix, run-length histogram, and fractal features. A customized tissue signature software has been developed to analyze image data obtained from clinical US scanners. Means comparison testing and multivariate analysis techniques are used to compare the numbers generated for a particular region of interest. By integrating these techniques into the radiologist's interpretation of the sonogram, the quantitative information gained may lead to earlier detection of lesions difficult to see with the human eye.

Humans↗

Lateral ventricle injection of the protein synthesis inhibitor anisomycin impairs long-term memory in a spatial memory task.

Although protein synthesis inhibition has been shown to affect long-term memory in a wide variety of animal species, cases have been reported in which protein synthesis inhibition failed to affect memory consolidation [S. Wittstock, R. Menzel, Color learning and memory in honey bees are not affected by protein synthesis inhibition, Behav. Neural Biol., 62 (1994) 224-229.]. Most findings argue that the critical time for protein synthesis is during or immediately after training. However, other reports show a second time window, hours after training, where protein synthesis inhibition can cause amnesia [F.M. Freeman, S.P.R. Rose, A.B. Scholey, Two time windows of anisomycin-induced amnesia for passive avoidance training in the day-old chick, Neurobiol. Learn. Mem., 63 (1995) 291-295.][G. Grecksch, H. Matthies, Two sensitive periods for the amnesic effect of anisomycin, Pharmacol. Biochem. Behav., 12 (1980) 663-665.]. In this study, we addressed two questions: (1) Is protein synthesis essential for spatial memory? and (2) At what injection time window(s) will protein synthesis inhibition cause spatial memory amnesia? We report that bilateral intraventricular microinjection of anisomycin (Ani) impairs consolidation of long-term memory, in the hippocampal-dependent Morris water maze spatial memory task. Memory was impaired in a dose-dependent manner without affecting short-term memory. Spatial memory was affected only if Ani was injected 20 min before performing the task and not in any other time window before or after the behavioral test. The inhibition did not affect pre-existing memories or the capability to memorize once the effect of the inhibition diminished.

Animals↗

Localizing acute stroke-related EEG changes: assessing the effects of spatial undersampling.

Because of its sensitivity to metabolic and ionic disturbances related to ischemia, the EEG can be a potentially useful tool for acute stroke detection and for monitoring affected tissue. However, the clinical use of the EEG in detecting stroke is determined in part by how accurately the spatial information is characterized. The purpose of the current study was to determine the effects of spatial undersampling on the distribution and interpretation of the stroke-related topographic EEG. Using a 128-channel sensor montage, EEG was recorded from six stroke patients acutely (between 8 and 36 hours) after symptom onset. The EEG was submitted to a spectral analysis and was compared with patient symptoms and MRI and computed tomographic findings. To determine loss of spatial and clinical information resulting from spatial undersampling, the average-referenced data from the original 128-channel recording montage were subsampled into 64-, 32-, and 19-channel arrays. Furthermore, the analytical findings were compared with a board-certified electroencephalographer's review of the raw EEG using a conventional clinical montage. As predicted, the results showed that accurate description of stroke-related topographic EEG changes is dependent on adequate spatial sampling density. Accurate description of the spatial distribution of the stroke-related EEG was achieved only with the 64- and 128-channel EEG. As the recording density decreases to 32 channels, the distribution of the scalp EEG spectra is distorted, potentially resulting in mislocalization of the affected region. Results of the clinical review by an expert electroencephalographer corroborated the quantitative analyses, and the results also demonstrated the shortcomings of the conventional 10-20 recording density for capturing focal EEG abnormalities in several cases. The EEG provides useful information about the localization of acute cerebral ischemia, but recording densities of 64 channels or higher are required for accurate spatial characterization of focal stroke-related EEG changes.

Adult↗

Differential exploitation of the inertia tensor in multi-joint arm reaching.

The identification of the kinaesthetic information used for directing 3D multi-joint arm movements toward a target remains an open question. Several psychophysical studies have suggested that the ability to perceive and control the spatial orientation of our limbs depends on the exploitation of the eigenvectors (e (3)) of the inertia tensor (I ( ij )), which correspond to the arm rotational inertial axes. The present experiment aimed at investigating whether e (3) was used as a collective variable to direct the masses toward the target and hence to control the spatial accuracy of the final hand position. Natural, unconstrained, three-dimensional multi-joint reaching movements were submitted to alterations of forearm mass distribution. Given the existence of several "sensorimotor strategies" for the control of arm movements, the participants were a priori contrasted and ranged in groups according to their reliance on either visual or kinaesthetic information. The results indicated (1) the dependency of the arm's directional control on I ( ij ) parameters, (2) a non-linear relationship between the performance predicted by the inertia tensor and the observed performance, depending on the deviation amplitude and (3) the presence of a large inter-individual variability suggesting the existence of different strategies, including proprioceptive compensation mechanisms. This study validates in unconstrained multi-joint arm movements the exploitation of the inertia tensor by the central nervous system, thus simplifying the coordination of the segments' masses during reaching. The results also provide evidence for the existence of motor alternatives in exploiting proprioceptive information that may depend on spatial referencing modes.

Adult↗

Excitotoxic lesions of the pre- and parasubiculum disrupt the place fields of hippocampal pyramidal cells.

To determine what influence the pre- and parasubiculum regions of the hippocampal formation have on neural representations within the dorsal hippocampus, single-unit recordings were made as rats with bilateral ibotenic acid lesions centered on the former regions (n = 4) or control surgeries (n = 3) foraged freely. Spatial firing specificity was measured using an information content procedure. Cells from lesioned animals (n = 57) provided significantly less spatial information than cells from control animals (n = 44). Whereas some degree of location-related activity (place fields) was observed in 98% of neurons recorded from control animals, it was observed in only 65% of the neurons from lesioned animals. The spatial resolution of the intact place fields appeared to be compromised in lesioned animals as a result of their having a higher firing rate outside the place field. These findings indicate that the pre- and parasubiculum regions have a major role in maintaining the specificity of the place field firing of hippocampal pyramidal cells. Since previous data indicate that these lesioned animals displayed delay-dependent deficits in spatial tasks, these findings also suggest that a disruption in place field activity may be a causal factor in this spatial memory deficit.

Action Potentials↗

Effects of electrical coupling on the cone-horizontal cell circuit in the catfish retina.

Based on experimental data, a model of the cone-horizontal cell (L-HC) circuit has been developed for the luminosity channel of the catfish retina and impulse responses of cones and L-HC's were replicated for various experimental conditions. Negative feedback from L-HC to the cone pedicle and increases in the feedback gain, convert monophasic impulse responses to those that are biphasic, smaller and faster. Electrical coupling of cones and L-HC's lead to decremental spread of 2 radially outgoing waves with time courses of the coupled cones and L-HC's dependent on the spatial organization of the negative feedback circuit: however, the L-HC's impulse response on spreading outward shows an initial increase before decreasing. Interactions of the cone and L-HC waves were studied using Laplace transforms and the convolution theorem. The presence of a negative feedback circuit leads to deviations of the electrotonic decay from an exponential function. As a result of the dependency of the feedback gain on H0, electrical coupling introduces non-linearities in the cone-L-HC circuit that are dependent on the mean illuminance level.

Animals↗