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Results for “Spatiotemporal variation”

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At least 145 records · Page 8Linked to original sources

PubMed2003

Seasonal cycle of VOCs in apartments.

To assess the adverse health effects of volatile organic compounds (VOCs), epidemiological studies combine the health outcome of individuals with their concomitant VOC exposure. While the latter is representative of the studied period, health effects might also be the result of long-term exposure or emerge in consequence of a peak pollution throughout the year. To address these problems, additional information about the spatiotemporal distribution of VOCs is necessary. The present paper aims at elucidating the spatial and temporal variation of VOC concentrations in Leipzig, Germany. The analysis is based on 1499 indoor and 222 outdoor measurements taken in the period between 1994 and 2001. All data were collected in the frame of epidemiological studies (Diez et al., 1999; Fritz et al., 1998; Schulz et al., 1999). The analysis comprised concentrations of 30 VOCs belonging to the groups of alkanes, cycloalkanes, aromatics, volatile halogenated hydrocarbons, and terpenes. We found that the VOC load in indoor air is, on average, 10 times higher than outdoors. For the studied period there was a clear downward tendency for all VOCs in apartments in Leipzig, except for terpenes which show an upward trend in the period 1996-99. In indoor air we observe an annual cycle for the total VOC concentration as well as the sum concentrations of the above called groups. Highest concentrations occur during the winter months, approximately three times higher than the summer burden. We summarize this finding in a seasonal model, which is fitted to our measurements. Based on the model we develop a procedure for seasonal adjustment, which enables to roughly estimate the annual peak concentration utilizing one monthly observation.

Air Pollution, Indoor↗

PubMed2001

Amorphous thin film growth: effects of density inhomogeneities.

A nonlinear stochastic growth equation for the spatiotemporal evolution of the surface morphology of amorphous thin films in the presence of potential density variations is derived from the relevant physical symmetries and compared to recent experimental results. Numerical simulations of the growth equation exhibit a saturation of the surface morphology for large film thickness originating from the inclusion of the density inhomogeneities. Furthermore, we argue why moundlike surface structures observed on vapor deposited amorphous films are not the result of the Grinfeld instability.

Journal Article↗

PubMed2005

Statistical characterizations of spatiotemporal patterns generated in the Swift-Hohenberg model.

Two families of statistical measures are used for quantitative characterization of nonequilibrium patterns and their evolution. The first quantifies the disorder in labyrinthine patterns, and captures features like the domain size, defect density, variations in wave number, etc. The second class of characteristics can be used to quantify the disorder in more general nonequilibrium structures, including those observed during domain growth. The presence of distinct stages of relaxation in spatiotemporal dynamics under the Swift-Hohenberg equation is analyzed using both classes of measures.

Journal Article↗

PubMed2004

Spiking neural network for recognizing spatiotemporal sequences of spikes.

Sensory neurons in many brain areas spike with precise timing to stimuli with temporal structures, and encode temporally complex stimuli into spatiotemporal spikes. How the downstream neurons read out such neural code is an important unsolved problem. In this paper, we describe a decoding scheme using a spiking recurrent neural network. The network consists of excitatory neurons that form a synfire chain, and two globally inhibitory interneurons of different types that provide delayed feedforward and fast feedback inhibition, respectively. The network signals recognition of a specific spatiotemporal sequence when the last excitatory neuron down the synfire chain spikes, which happens if and only if that sequence was present in the input spike stream. The recognition scheme is invariant to variations in the intervals between input spikes within some range. The computation of the network can be mapped into that of a finite state machine. Our network provides a simple way to decode spatiotemporal spikes with diverse types of neurons.

Action Potentials↗

PubMed2004

Variational method for finding periodic orbits in a general flow.

A variational principle is proposed and implemented for determining unstable periodic orbits of flows as well as unstable spatiotemporally periodic solutions of extended systems. An initial loop approximating a periodic solution is evolved in the space of loops toward a true periodic solution by a minimization of local errors along the loop. The "Newton descent" partial differential equation that governs this evolution is an infinitesimal step version of the damped Newton-Raphson iteration. The feasibility of the method is demonstrated by its application to the Hénon-Heiles system, the circular restricted three-body problem, and the Kuramoto-Sivashinsky system in a weakly turbulent regime.

Journal Article↗

PubMed1981

Sensitivity to spatiotemporal combined luminance and chromaticity contrast.

Contrast-detection thresholds for various combinations of chromaticity and luminance differences were obtained for spatiotemporal square-wave modulation of a yellow field. The results are expressed in terms of excitation of the Vos-Walraven R,G primaries. For every spatiotemporal frequency the thresholds can be approximated by an ellipse in the red-green plane. Large variations were found in the orientation, magnitude, and eccentricity of the discrimination ellipses. It seems that a simple threshold function appears to be sufficient to describe the experimental data. Although the eye does not perceive hue contrast for high spatial frequencies, its sensitivity is not governed mainly by summation of the red and green channels.

Color↗

PubMed1999

Modeling the hemodynamic response in single-trial functional MRI experiments.

Today, most studies of cognitive processes using functional MRI (fMRI) experiments adopt a single-trial design. Highly flexible stimulation paradigms require new statistical models in which not only the activation amount but also the time course of the measured hemodynamic response is analyzed. Most previous approaches have been based on a linear regression context and have introduced hemodynamic model functions to improve the signal detection. In this report a nonlinear regression context is derived, from which shape parameters for the hemodynamic response are obtained per trial and per region of interest. These parameters allow the investigation of stimulus-induced shape variations of the hemodynamic response. By embedding the estimation into a robust statistical framework and rigorously analyzing the spatiotemporal interactions in the fMRI data, it is possible to derive statistically valid descriptions of single hemodynamic responses. The model, estimation algorithm, validation, and an example analysis from a single-trial fMRI study are reported. Magn Reson Med 42:787-797, 1999.

Algorithms↗

PubMed1998

Modulation of the frequency of spontaneous sarcoplasmic reticulum Ca2+ release events (Ca2+ sparks) by myoplasmic [Mg2+] in frog skeletal muscle.

The modulation by internal free [Mg2+] of spontaneous calcium release events (Ca2+ "sparks") from the sarcoplasmic reticulum (SR) was studied in depolarized notched frog skeletal muscle fibers using a laser scanning confocal microscope in line-scan mode (x vs. t). Over the range of [Mg2+] from 0.13 to 1.86 mM, decreasing the [Mg2+] induced an increase in the frequency of calcium release events in proportion to [Mg2+]-1.6. The change of event frequency was not due to changes in [Mg-ATP] or [ATP]. Analysis of individual SR calcium release event properties showed that the variation in event frequency induced by the change of [Mg2+] was not accompanied by any changes in the spatiotemporal spread (i.e., spatial half width or temporal half duration) of Ca2+ sparks. The increase in event frequency also had no effect on the distribution of event amplitudes. Finally, the rise time of calcium sparks was independent of the [Mg2+], indicating that the open time of the SR channel or channels underlying spontaneous calcium release events was not altered by [Mg2+] over the range tested. These results suggest that in resting skeletal fibers, [Mg2+] modulates the SR calcium release channel opening frequency by modifying the average closed time of the channel without altering the open time. A kinetic reaction scheme consistent with our results and those of bilayer and SR vesicle experiments indicates that physiological levels of resting Mg2+ may inhibit channel opening by occupying the site for calcium activation of the SR calcium release channel.

Adenine Nucleotides↗

PubMed2002

Remote assessment of forest health in southern Arizona, USA: evidence for ozone-induced foliar injury.

This paper examines possible ozone-induced foliar injury to ponderosa pine areas in the Rincon Mountains of southern Arizona from 1972 to 1992. Spatiotemporal differences in a satellite-derived vegetation index (VI) are examined with respect to antecedent moisture conditions, temporal variations in ozone exposure levels, and measured foliar injury values from 1985. Seasonal ozone exposure levels (SUM60 and W126) increased from 1982 to 1998 and were significantly correlated (r = 0.49 and 0.53, alpha = 0.05) with annual population totals in the Tucson area. Extensive masking of satellite images from 1972, 1986, and 1992 resulted in two optimal change detection areas, with one site, TVWMica, exposed mostly to the Tucson air pollution plume, while the other site, EMica, was more protected from Tucson-derived pollution. An overall increase in VI from 1972 to 1992 at both sites appears to have been caused by an increase in moisture availability. Larger foliar injury values in 1985 were associated with a smaller increase in VI (i.e., a smaller increase in green leaf biomass) from 1972 to 1986. From 1972 to 1986 and from 1986 to 1992, VI values at TV/WMica increased at a slower rate compared to those at EMica. The reduced increase in "green-up" may have been caused partially by ozone-induced foliar injury and resulting decreases in green leaf biomass. However, these spatial differences in VI values may have also been caused by a number of other factors. Results nevertheless reveal the strong possibility of distinct, topographically based, spatial variations in ozone-induced foliar injury within the Rincons.

Air Pollutants↗

PubMed1999

Intraretinal axon diameter: a single cell analysis in the marmoset (Callithrix jacchus).

We have labelled individual retinal ganglion cells of a New World primate, the common marmoset (Callithrix jacchus) with neurobiotin and then measured axon, soma and dendritic field diameter. A total of 111 cells were analysed (62 parasol cells, 22 midget cells, 16 hedge cells and 11 small bistratified cells). When all retinal ganglion cells were grouped together axon diameter was positively correlated to soma diameter. When analysed according to cell class only midget cells showed a positive correlation between soma size and mean axon diameter. Dendritic field diameter and mean axon diameter of both parasol and midget cells showed significant correlations. Axon diameter is not constant along the intraretinal length of the axon and the rate of change in diameter appears to be related to the cell class and the initial size of the axon. Midget cell axons showed a rapid increase of up to 20% over the first 200 microm in contrast to parasol cell axons which increased more slowly over this distance but then showed a marked increase in diameter of up to 40% over the next 450 microm. However, axon diameter did not remain at these increased diameters but decreased at greater distances from the soma. The degree to which an axon changes its diameter is related to retinal ganglion cell class and the initial size of the axon. We postulate that these variations in intraretinal axon diameter may have a direct influence on conduction velocity and reflect a compensatory mechanism to minimise spatiotemporal dispersion along the visual pathway.

Animals↗

PubMed2001

Multiple protein functions of paired in Drosophila development and their conservation in the Gooseberry and Pax3 homologs.

The Drosophila segmentation gene paired, whose product is homologous to the Drosophila Gooseberry and mammalian Pax3 proteins, has three general functions: proper development of the larval cuticle, survival to adulthood and male fertility. Both DNA-binding domains, the conserved N-terminal paired-domain and prd-type homeodomain, are required within the same molecule for all general paired functions, whereas a conserved His-Pro repeat located near its C terminus is a transactivation domain potentiating these functions. The C-terminal moiety of Paired includes two additional functional motifs: one, also present in Gooseberry and Pax3, is required for segmentation and cuticle development; the other, retained only in Gooseberry, is necessary for survival. The male fertility function, which cannot be replaced by Gooseberry and Pax3, is specified by the conserved N-terminal rather than the divergent C-terminal moiety of Paired. We conclude that the functional diversification of paired, gooseberry and Pax3, primarily determined by variations in their enhancers, is modified by adaptations of their coding regions as a necessary consequence of their newly acquired spatiotemporal expression.

Amino Acid Motifs↗

PubMed1984

Critical problems in spatial vision.

In recent years the study of spatial vision seems to have come almost full circle. Localized stimuli (such as lines, bars, and edges) were abandoned in favor of textured patterns (such as sinusoidal gratings), a trend that was accelerated by the discovery that gratings of sufficiently different spatial frequencies or orientations (stimuli localized in the Fourier domain) were detected independently. This led to various attempts to model form vision in terms of spatial frequency analysis. More recently there has been a shift toward models that include, once again, the local aspects of spatial processing; this trend is more consistent with both retinal and cortical physiology. (Still surviving is the notion of a complete set of orthonormal basis functions, but not sinusoidal ones.) Other important developments include attempts to model spatiotemporal interaction, and the discovery that spatial processing takes on an entirely different character in the absence of any temporal variation (i.e., when the retinal image is stabilized). We attempt to trace these developments in terms of a selected group of representative studies, which we examine in some depth.

Biomedical Engineering↗

PubMed2003

Regulation of the PAI-1 promoter by circadian clock components: differential activation by BMAL1 and BMAL2.

Circadian variation in plasminogen activator inhibitor-1 (PAI-1) production likely contributes to increased risk of myocardial infarction and decreased efficacy of thrombolytic therapy during the morning. In this study, we characterize the abilities of fundamental molecular components of intrinsic circadian clocks to regulate the human PAI-1 promoter in transfected endothelial cells. Both CLOCK:BMAL1 and CLOCK:BMAL2 heterodimers activate the PAI-1 promoter through requisite proximal (-565 to -560 bp) and distal (-680 to -675 bp) E-box enhancers. Although the distal E-box overlaps the 4G/5G polymorphism of the PAI-1 promoter, allelic variation at this site does not influence CLOCK:BMAL1-and CLOCK:BMAL2-mediated transactivation. Together, CLOCK:BMAL1 and CLOCK:BMAL2 make additive contributions to PAI-1 gene transcription. While the abilities of these heterodimers to activate gene expression differ by twofold, the susceptibilities of these circadian activators to inhibition by period and cryptochrome proteins are equivalent and redox independent. Given that BMAL1 and BMAL2 differ in their spatiotemporal distributions, such distinctions may allow intrinsic circadian clocks to modulate the amplitudes of their oscillators, while maintaining circadian periodicity. In this way, fundamental circadian clock components may drive circadian variation in PAI-1, which in turn influences the pathogenesis, timing, and treatment of acute atherothrombotic events.

ARNTL Transcription Factors↗

PubMed1999

Retinal waves are governed by collective network properties.

Propagating neural activity in the developing mammalian retina is required for the normal patterning of retinothalamic connections. This activity exhibits a complex spatiotemporal pattern of initiation, propagation, and termination. Here, we discuss the behavior of a model of the developing retina using a combination of simulation and analytic calculation. Our model produces spatially and temporally restricted waves without requiring inhibition, consistent with the early depolarizing action of neurotransmitters in the retina. We find that highly correlated, temporally regular, and spatially restricted activity occurs over a range of network parameters; this ensures that such spatiotemporal patterns can be produced robustly by immature neural networks in which synaptic transmission by individual neurons may be unreliable. Wider variation of these parameters, however, results in several different regimes of wave behavior. We also present evidence that wave properties are locally determined by a single variable, the fraction of recruitable (i.e., nonrefractory) cells within the dendritic field of a retinal neuron. From this perspective, a given local area's ability to support waves with a wide range of propagation velocities-as observed in experiment-reflects the variability in the local state of excitability of that area. This prediction is supported by whole-cell voltage-clamp recordings, which measure significant wave-to-wave variability in the amount of synaptic input a cell receives when it participates in a wave. This approach to describing the developing retina provides unique insight into how the organization of a neural circuit can lead to the generation of complex correlated activity patterns.

Animals↗

PubMed1984

The assessment of evoked potential contrast thresholds using real-time retrieval.

Electrophysiologic contrast sensitivity functions (CSF) have been estimated using lock-in amplifier signal retrieval of the visually evoked response (VER). These CSFs were compared with CSFs obtained psychophysically using the same stimulus conditions. The two measures of contrast sensitivity behave similarly in response to variations of temporal and spatial frequency. The major advantage of using real-time retrieval is speed. Threshold for a single spatiotemporal condition can be estimated in as little as 20 sec, making the application of electrophysiologic contrast sensitivity testing feasible for clinical populations.

Adult↗

PubMed2004

Two-dimensional dispersion-managed light bullets in Kerr media.

We propose a scheme for stabilizing spatiotemporal solitons (STSs) in media with cubic self-focusing nonlinearity and "dispersion management," i.e., a layered structure inducing periodically alternating normal and anomalous group-velocity dispersion. We develop a variational approximation for the STS, and verify results by direct simulations. A stability region for the two-dimensional (2D) STS (corresponding to a planar waveguide) is identified. At the borders between this region and that of decay of the solitons, a more sophisticated stable object, in the form of a periodically oscillating bound state of two subpulses, is also found. In the 3D case (bulk medium), all the spatiotemporal pulses spread out or collapse.

Journal Article↗

PubMed2004

Consequences of unequal population size, asymmetric gene flow and sex-biased dispersal on population structure in brook charr (Salvelinus fontinalis).

Unravelling relationships between dispersal and population structure requires considering the impacts of assumption violations of indirect gene flow models in a given system. We combined temporal, individual and coalescent-based analyses of microsatellite DNA variation to explore the general hypothesis that unequal effective population size (Ne), asymmetric gene flow (m) and nonrandom (sex-biased) individual dispersal had an important effect on spatiotemporal population structuring in lake-dwelling brook charr (Salvelinus fontinalis). This integrative examination shed light on the dichotomous structuring observed between an outlet and three tributary-spawning populations and their potential for adaptive divergence. It revealed further that finer tributary population structuring incongruent with drainage structure has been shaped by asymmetric m from one population with a large Ne towards two populations of smaller Ne. Gene flow among the tributaries was also mediated mainly by male-biased dispersal. However, longer distance dispersal from tributaries to the outflow was female-biased. Spatially dependent sex-biased dispersal may have contributed therefore to gene flow at different levels of population structuring. Our results demonstrate how dispersal and population structure may interrelate to produce spatial variation in intraspecific diversity, and are therefore relevant for conservation programmes seeking to define conservation units or predict recolonization rates of extirpated populations.

Animals↗

PubMed2003

Diagnosis and exploration of massively univariate neuroimaging models.

The goal of this work is to establish the validity of neuroimaging models and inferences through diagnosis and exploratory data analysis. While model diagnosis and exploration are integral parts of any statistical modeling enterprise, these aspects have been mostly neglected in functional neuroimaging. We present methods that make diagnosis and exploration of neuroimaging data feasible. We use three- and one-dimensional summaries that characterize the model fit and the four-dimensional residuals. The statistical tools are diagnostic summary statistics with tractable null distributions and the dynamic graphical tools which allow the exploration of multiple summaries in both spatial and temporal/interscan aspects, with the ability to quickly jump to spatiotemporal detail. We apply our methods to a fMRI data set, demonstrating their ability to localize subtle artifacts and to discover systematic experimental variation not captured by the model.

Algorithms↗