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PubMed2002

Diffuse light increases metabolic activity in the lateral geniculate nucleus, visual cortex, and superior colliculus of the cone-dominated ground squirrel visual system.

Ground squirrels were monocularly exposed to either steady- or flashing-diffuse light for 45 min following an injection of 14C 2-deoxyglucose (2-DG). Autoradiographic analysis indicated greater metabolic activity in the lateral geniculate nucleus, visual cortex and superior colliculus (SC) of the hemisphere lying contralateral to and receiving input from the diffusely stimulated eye (covered by a white mask), than in the corresponding regions of the other hemisphere receiving input from the occluded eye (black mask). The diffuse light results for the cortex and colliculus of the diurnal ground squirrel are different from those for the nocturnal rat. In the rat visual cortex, there is no difference between metabolic activity under conditions of diffuse light (steady or flashing) and under darkness. In the rat SC, although flashing-diffuse light increases metabolic activity (as is the case for the squirrel), steady-diffuse light decreases it to a level below that which occurs in darkness. The cortex and colliculus differences in 2-DG response to diffuse light between the ground squirrel and rat were attributed to differences in the operations of their respective cone- and rod-dominated visual systems.

Animals↗

PubMed2002

Shape imposed by secondary structure of a polypeptide affects its free diffusion through liquid-filled pores.

The purpose of the present study was to investigate the effect of secondary structure of three model polypeptides on their apparent permeability (P(app)) across a synthetic, microporous membrane. Poly-L-lysine (PL), poly-L-glutamate (PGlu), and poly-L-lysine-L-phenylalanine (1:1) (PLP) were selected because a solution environment in which their predominant secondary structure is random coil (RC), alpha-helix, and beta-sheet, respectively, is easily achieved. The conformation of each polypeptide was verified by circular dichroism (CD). Diffusion studies were conducted under sink conditions at 25 degrees C across a microporous polyester membrane using a donor concentration of 0.02 mM for each model polypeptide. NMR was utilized to obtain a second estimation of the diffusion coefficient for each polypeptide. The equivalent hydrodynamic radii (R(e)) of the three model polypeptides were calculated using the values of the diffusion coefficient obtained by both NMR and the classic in vitro diffusion studies. The viscosity of each polypeptide solution was also determined to investigate the effect of viscosity on the aqueous diffusion coefficient. Statistical analysis demonstrated a significant (P < 0.05) difference in both P(app) and the aqueous diffusion coefficient (D(aq)), as well as the calculated R(e) values, between all three model polypeptides and there was no significant (P > 0.05) difference in the viscosity of the polypeptide solutions. Values of D(aq) and R(e) calculated from the diffusion studies were in relatively close agreement to those obtained using NMR. The logarithm of P(app) was highly correlated (r = -0.961) with the values of R(e) calculated from NMR (R(e (NMR))) rather than the mw of the polypeptides (r = 0.681). Values of the Perrin or shape factor which deviate substantially from unity are suggestive of a non-spherical or ellipsoid shape and were 1.22 +/- 0.20, 1.55 +/- 0.11, and 2.38 +/- 0.20 for PGlu, PL, and PLP, respectively. In conclusion, the observed difference in the membrane transport/diffusion of the three model polypeptides is suggested to be due to the shape associated with the secondary structure of each macromolecule, rather than the polypeptide's mw or the viscosity of the dilute polypeptide solution.

Circular Dichroism↗

PubMed2001

Late temporal lobe necrosis in patients with nasopharyngeal carcinoma: evaluation with combined multi-section diffusion weighted and perfusion weighted MR imaging.

Late temporal lobe necrosis is a well-known and serious complication in patients with nasopharyngeal carcinoma (NPC) following radiotherapy. Owing to the close proximity to the skull base, the medial temporal lobes are inevitably included in the target volume of irradiation. Patients with NPC provide a unique opportunity in study of delay radiation effect in normal human brain. The objective of this study was to evaluate late temporal lobe radiation injury by combined multi-section diffusion weighted and perfusion weighted MR imaging. We prospectively studied 16 patients with typical clinical symptoms of late temporal lobe necrosis or other abnormalities in the temporal lobes incidentally detected by conventional MR imaging. All patients had a previous history of radiotherapy for histologically proven NPC. Conventional T1- and T2-weighted images, fast gradient echo with echo-planar diffusion-weighted and perfusion-weighted MR imaging were performed. Apparent diffusion coefficient (ADC) map and relative cerebral blood volume (rCBV) map were computed via commercially available software. MR diffusion and perfusion images were then analyzed and graded by two independent observers with focusing on the diffusion and perfusion mismatch. The temporal lobe lesions displayed marked high diffusion on the ADC map. The rCBV map also revealed marked hypoperfusion in these temporal lobe lesions in all patients. The areas of abnormality on the rCBV map were significantly larger than the lesions on the ADC map in 14 patients (observer 1) and 13 patients (observer 2). Since late temporal lobe necrosis is probably caused by damage of the endothelium of vessels and ischemia, perfusion and diffusion mismatch might imply injured tissue but potentially salvageable brain tissue. A mismatch may be potentially used to predict the response to treatment in-patients with late temporal lobe necrosis.

Adult↗

PubMed2003

Solid-state 13C and 1H spin diffusion NMR analyses of the microfibril structure for bacterial cellulose.

To obtain further information about the cause for the rather large splitting of the C4 resonance line into the downfield (C4D) and upfield (C4U) lines in CP/MAS 13C NMR spectra for native cellulose, 13C and 1H spin diffusion measurements have been conducted by using different types of bacterial cellulose samples. In 13C spin diffusion measurements, the C4D resonance line is selectively inverted by the Dante pi pulse sequence and the 13C spin diffusion is allowed to proceed from the C4D carbons to other carbons including the C4U carbons with use of the 13C4-enriched bacterial cellulose sample. The analysis based on the simple spin diffusion theory for the process experimentally observed reveals that the C4U carbons may be located at distances less than about 1 nm from the C4D carbons. In 1H spin diffusion measurements, poly(vinyl alcohol) (PVA) films in which ribbon assemblies of bacterial cellulose are dispersed are employed and the 1H spin diffusion process is examined from the water-swollen PVA continuous phase to the dispersed ribbon assemblies by the 13C detection through the 1H-13C CP technique. As a result, it is found that the C4D and C4U carbons are almost equally subjected to the 1H spin diffusion from the PVA phase, indicating that the C4U carbons are not localized in some limited area, e.g. in the surfacial region, but are distributed in the whole area in the microfibrils. These experimental results suggest that the C4U carbons may exist as structural defects probably due to conformational irregularity associated with disordered hydrogen bonding of the CH(2)OH groups in the microfibrils.

Acetobacter↗

PubMed2003

Deposition fractions of 218Po in diffusion chambers.

After radon gas diffuses into a diffusion chamber, 218Po will be formed. Due to its short half-life, a fraction f of 218Po decays before deposition onto available inner surfaces of the chamber, and the deposition fraction (1-f) represents the part which decays after deposition. In the present work, f has been experimentally determined for six diffusion chambers with different materials and dimensions using the radial distribution of track density on the LR115 detectors inside the diffusion chambers. For all the six studied diffusion chambers, f was found to be approximately 0.4. Therefore, the deposition fraction does not depend on the shape and dimensions of the diffusion chambers, the surface to volume ratios or the internal surface materials of the diffusion chambers.

Journal Article↗

PubMed2003

Hole-burning diffusion measurements in high magnetic field gradients.

We describe methods for the measurement of translational diffusion in very large static magnetic field gradients by NMR. The techniques use a "hole-burning" sequence that, with the use of fringe field gradients of 42 T/m, can image diffusion along one dimension on a submicron scale. Two varieties of this method are demonstrated, including a particularly efficient mode called the "hole-comb," in which multiple diffusion times comprising an entire diffusive evolution can be measured within the span of a single detected slice. The advantages and disadvantages of these methods are discussed, as well as their potential for addressing non-Fickian diffusion, diffusion in restricted media, and spatially inhomogeneous diffusion.

Journal Article↗

PubMed1996

Disk diffusion, agar dilution and the E-test for susceptibility testing of Corynebacterium jeikeium.

OBJECTIVE: The susceptibilities to penicillin, tetracycline, erythromycin, gentamicin, vancomycin and teicoplanin of 58 strains of Corynebacterium jeikeium were assessed by disk diffusion and agar dilution reference methods. METHODS: Zone sizes and minimal inhibitory concentrations (MIC) by agar dilution were interpreted using the ranges in the NCCLS tables for organisms other than Haemophilus, Neisseria gonorrhoeae, and Streptococcus pneumoniae. RESULTS: By agar dilution, 14%, 88%, 17% and 26% of the 58 isolates were susceptible to penicillin, tetracycline, erythromycin, and gentamicin, respectively. Using the breakpoints for Listeria monocytogenes, all strains showed concordant results for penicillin by disk diffusion. Discrepancies in the interpretative categories by disk diffusion were found in four cases (two very major and two minor) for tetracycline, in nine (two very major, two major, and five minor) for erythromycin, and in 1 case (very major) for gentamicin. All 58 strains were susceptible to vancomycin and teicoplanin by agar dilution and disk diffusion. The overall agreement of interpretative disk diffusion for all six antibiotics was 95.9%. In addition, all strains were susceptible to both glycopeptides by E-test. However, for vancomycin the MIC results in 58.6% were two log2 dilutions and in 1.7% more than two log2 dilutions higher by E-test than by agar dilution, whereas for teicoplanin agreement within one log2 dilution was 100%. CONCLUSIONS: Further evaluation of methodologies of disk diffusion is required to obtain a better agreement for erythromycin and tetracycline. The criteria of the NCCLS for interpretation of disk diffusion are adequate for susceptibility testing of C. jeikeium to penicillin, gentamicin, vancomycin and teicoplanin.

Journal Article↗

PubMed2000

In vivo diffuse damage in human vertebral trabecular bone.

Accumulation of microdamage in vivo may lead to loss of bone quality. Until recently, linear microcracks were the only known form of in vivo microdamage, but through the use of confocal microscopy an additional level of damage (diffuse damage) has been identified. In this study, in vivo diffuse damage was characterized and quantified in human vertebral trabecular bone as a function of tissue morphology, age, race, gender, and previously quantified in vivo linear microcracks. Presence of diffuse damage in human vertebral tissue was confirmed and validated by simultaneous use of polarized, ultraviolet, and laser confocal microscopy. Diffuse damage was found to occur preferentially within trabecular packets rather than in interstitial bone (p < 0.05). It was consistently higher in men compared with women (p < 0.05), but was not different by race or age group. Diffuse damage did not correlate with linear microcracks, but both exhibited the same probability distribution in which the percentage of individuals having a particular amount of damage decreased exponentially as damage content increased. These findings suggest that diffuse damage accumulation and repair are governed by the same biological phenomena as microcracks, but diffuse damage contributes independently to the microdamage content of bone.

Adult↗

PubMed2004

In situ investigation of drug diffusion in hydrogels by the refractive index method.

This work describes a simple but novel analytical method for in situ monitoring of the diffusion process of drugs in hydrogels based on refractive index measurements. The diffusion process was monitored by recording the refraction of a laser beam passing through a triangular cell, which allows the determination of changes in the refractive index distribution from the deviated distance of the linear beam. Compared to conventional methods, this new method exhibits advantages such as more simplicity, lower cost, and speed. Further, the refractive index method permits the determination of the concentration distribution of solutes in the hydrogels at any time during the diffusion process under nondestructive circumstances. The precision was determined by successfully applying this new method to the diffusion of a typical antibiotic drug, cefazolin sodium, in agarose gels of various concentrations. By employing Fick's second law, the diffusion behavior was investigated and the diffusion coefficients of cefazolin sodium in agarose gels were therefore obtained. Amsden's physical model based on obstruction effect was applied to the simulation of the diffusion process of cefazolin sodium and turned out to fit the results quite well.

Journal Article↗

PubMed2006

Understanding macroscopic diffusion of adsorbed molecules in crystalline nanoporous materials via atomistic simulations.

The diffusion rates of molecules inside nanoporous materials lie at the heart of many large-scale industrial applications of these materials. Quantitatively describing this diffusion, particularly diffusion of chemical mixtures in situations leading to net mass transport, remains challenging. Molecular dynamics (MD) simulations can play an important complementary role to experiments in this area. This Account describes applications of MD to diffusion in nanoporous materials with a particular focus on macroscopic diffusion, that is, diffusion involving mass transport. These methods have made useful contributions to developing mixing theories for predicting multicomponent diffusion from single-component data and to screening new classes of materials for practical applications.

Journal Article↗

PubMed2005

Diffusion of buffer layer assisted grown gold nanoclusters on Ru(100) and p(1 x 2)-O/Ru(100) surfaces.

Patterning of metallic clusters on surfaces is demonstrated by utilizing a buffer layer assisted laser patterning technique (BLALP). This method has been employed in order to measure the diffusion of AFM and STM characterized size selected gold nanoclusters (5-10 nm diameter), over Ru(100) and p(1 x 2)-O/Ru(100) surfaces. Optical linear diffraction from gold cluster coverage gratings was utilized for the macroscopic diffusion measurements. The clusters were found to diffuse on the surface intact without significant coalescence or sintering. The barrier for metastable gold nanocluster diffusion on the surface is thought to be lower than the energy required for surface wetting. The apparent activation energy for diffusion was found to depend on the cluster size, increasing from 6.2 +/- 0.4 kcal/mol for 5 nm clusters to 10.6 +/- 0.5 kcal/mol for 9 nm clusters. The macroscopic diffusion of gold nanoclusters has been studied on the p(1 x 2)-O/Ru(100) surface as well, where surface diffusion was found to be rather insensitive to the clusters size with activation energy of 5.5 +/- 1 kcal/mol. The difference between the two surfaces is discussed in terms of a better commensurability (higher level of friction) of the gold facets at the contact area with the clean Ru(100) than in the case of the oxidized surface.

Journal Article↗

PubMed2005

Rates and mechanisms of conversion of ice nanocrystals to hydrates of HCl and HBr: acid diffusion in the ionic hydrates.

This FTIR study focuses on solid-state chemistry associated with formation and interconversion of the ionic HX (X = Cl, Br) hydrates. Kinetic data are reported for conversions of ice nanocrystal arrays exposed to the saturation pressure of the acids in the 110 approximately 125 K range. The product is amorphous acid dihydrate in the case of HBr, and amorphous monohydrate for HCl. The rate-determining step is identified as HX diffusion through the hydrate product crust toward the interfacial reaction zone, rather than diffusion through ice, as commonly believed. Slowing of the conversion process is thus observed with increasing thickness of the crust. The diffusion coefficient (D(e)) and activation energy values for HX diffusion through the hydrates were evaluated with the help of the shrinking-core model. Hydrate crystallization occurs as a separate step, upon heating above 130 K. Subsequently, rates of reversible transitions between crystal di- and monohydrates were observed upon exposure to acid vapor and acid evacuation. In conversion from di- to monohydrate, the rate slows after fast formation of several layers; subsequently, diffusion through the product crust appears to be the rate-controlling step. The activation energy for HBr diffusion through crystal dihydrate is found to be significantly higher than that for the amorphous analogue. Conjecture is offered for a molecular mechanism of HX transport through the crystal hydrate, based on (i) spectroscopic/computational evidence for the presence of molecular HX bonded to X(-) in each of the ionic hydrate phases and (ii) the relative E(a) values found for HBr and HCl diffusion. Monte Carlo modeling suggests acid transport to the reaction zone along boundaries between "nanocrystallites" generated by multiple hydrate nucleation events at the particle surfaces. The reverse conversion, of crystalline monohydrate particles to the dihydrate phase, as well as dihydrate to trihydrate, displays nearly constant rate throughout the particle conversion; suggesting desorption of HX from the particle surface as the rate-limiting factor. Like for D(e), the activation energies for desorption were found to be approximately 20% greater for HCl than HBr for related hydrate phases.

Journal Article↗

PubMed2005

Proton diffusion determination and dual structure model for nickel hydroxide based on potential step measurements on single spherical beads.

Potential step measurement is carried out on single beads of spherical nickel hydroxide to determine the proton diffusion coefficient (D) and concentration of the effective proton vacancies (C). The semi-infinite diffusion equation for the initial stage and the finite diffusion equation for the long-term of the current response to potential step are used for deducing the D and C values. The diffusion coefficients deduced from short and long-term current responses are in the order of magnitude 10(-7) and 10(-10) cm2 s(-1), respectively. The sum of the effective proton vacancy concentrations associated with the two D values comes out to be equal within experimental error to the effective proton vacancy concentration converted from the released electricity during discharge. A dual structure model is proposed to interpret the above-mentioned findings, featuring densely packed grains within which proton diffusion is slow and an inter-grain matrix where proton diffusion is fast. With this model the huge difference (about 6 orders of magnitude) in D values reported in the literature as well as the controversy of the dependence of diffusion coefficient on the state of charge can be largely rationalized. This dual structure model is supported by SEM and AFM observations.

Journal Article↗

PubMed2005

Effect of surface resistances on the diffusion of binary mixtures in the silicalite single crystal membrane.

Diffusion of methane and argon mixtures through the silicalite single-crystal membrane is studied using the dual-control volume-grand canonical molecular dynamics method to understand how surface resistances alter selectivity and permeance. Comparison of results from intracrystalline transport and entrance simulations for binary mixtures of CH4 and Ar shows that the selectivity of silicalite membranes toward Ar is enhanced in the presence of the surface resistances. In both cases, however, diffusion of faster Ar molecules was inhibited by slower diffusing CH4 molecules, whereas diffusion of the latter remained unaffected. This behavior was explained by the difference between the magnitudes of surface resistances for two molecules, which is much smaller for Ar because of its smaller permeant-crystal interaction size. We find that selectivity of the membrane at the surface depends strongly on total feed pressure and temperature, whereas this dependence is weak for intracrystalline diffusion. Furthermore, we show that the selectivity at the surface diminishes with crystal thickness until a certain thickness is reached, whereas the intracrystalline selectivity remains constant with increasing thickness. Finally, a study of diffusion of C2H6 and CF4 mixtures shows that the diatomic ethane molecules diffuse faster inside the zeolite channels, but their desorption is hindered to a larger extent than that of a spherical molecule with larger diameter and lower heat of adsorption. This observation indicates that the difference in molecular geometry is also a significant factor to explain the exit effect.

Journal Article↗

PubMed2006

Molecular dynamics-based approach to study the anisotropic self-diffusion of molecules in porous materials with multiple cage types: application to H2 in losod.

The anisotropic self-diffusion of molecular hydrogen in the multiple cage clathrasil losod (LOS) is modeled by means of molecular dynamics (MD) simulations of up to 1 micros for the temperature range 900-1200 K while treating the framework as fully flexible. The LOS diffusion tensor is calculated employing an analytical method based on hopping rates. The diffusion in the c-direction of the unit cell is found to be approximately two times more rapid than in the a- and the b-directions, a characteristic of importance for the application of LOS as a membrane. The overall diffusion is based on five different hop types for which the individual hopping rates and diffusion barriers are calculated separately. We show explicitly that the shape and volume of the cages have a significant effect on the hopping rates and further that even small deformations of the circular Si6O6 apertures have a large influence on the energetic barrier for hydrogen diffusion. Compared to the single cage clathrasils dodecasil 3C (MTN) and sodalite (SOD), LOS has a lower diffusion rate. However, from a technical point of view this rate (at 573 K) is still fast enough for LOS to be interesting as a size-selective membrane or as a hydrogen-adsorption medium.

Journal Article↗

PubMed2007

Molecular and thermal diffusion coefficients of alkane-alkane and alkane-aromatic binary mixtures: effect of shape and size of molecules.

New molecular and thermal diffusion coefficients of binary mixtures of normal decane-normal alkanes and methylnaphthalene-normal alkanes are measured at atmospheric pressure and T = 25 degrees C. The normal alkanes used in this work include nC5-nC20. Thermal diffusion coefficients were measured in a thermogravitational column. Molecular diffusion coefficients were measured using an open-ended capillary tube technique. Results show a significant effect of molecular shape and size on thermal and molecular diffusion coefficients. Molecular diffusion coefficients show a monotonic behavior in both aromatic-normal alkane and normal decane-normal alkane mixtures. Thermal diffusion coefficients reveal a nonmonotonic trend with molecular size in the normal decane-normal alkane mixtures. This is the first report of the nonmonotonic behavior in the literature. The data presented in this paper provide an accurate self-molecular diffusion coefficient for nC10 from binary data.

Journal Article↗

PubMed1997

Evaluation of solute permeation through the stratum corneum: lateral bilayer diffusion as the primary transport mechanism.

Solute permeation across human stratum corneum (SC) was examined in terms of the fundamental bilayer transport properties. A mathematical model was developed to describe the macroscopic SC permeation via the interkeratinocyte lipid domain in terms of (i) the structure and dimensions of the SC, and (ii) the microscale lipid bilayer transport properties, which include the bilayer/water partition coefficient, the lateral diffusion coefficient, the interfacial transbilayer mass transfer coefficient, and the intramembrane transbilayer mass transfer coefficient. The relative importance of the diffusive resistances associated with the bilayer transport properties was evaluated with the model and experimental data. Lateral diffusion coefficients in SC lipid bilayers were calculated from 120 human skin permeability measurements, and compared with previously reported measurements made in SC-extracted lipids. Good qualitative and quantitative agreement was observed, indicating that, in the context of the model, the diffusive resistance associated with lateral diffusion is sufficient to explain the overall resistance of solute permeation through the SC. A similar analysis shows that the diffusive resistance associated with interfacial transbilayer transport is not capable of explaining the experimental permeation values, thus supporting this finding. The lateral diffusion analysis also revealed a bifunctional size dependence of transport within the SC, with a strong size dependence for small solutes (<300 Da) and a weak size dependence for larger solutes.

Biological Transport↗

PubMed2004

Observation of two diffusive relaxation modes in microemulsions by dynamic light scattering.

Water-in-oil microemulsions stabilized by AOT and dispersed in n-alkane oils with a constant molar water-to-surfactant ratio were studied by dynamic light scattering. A dilution series (in the range of volume fraction of water plus surfactant, phi approximately 0.02-0.52) was used, which allowed us to extract information about droplet sizes, diffusion coefficients, interactions, and polydispersity from experimental data. We report the observation of two diffusive relaxation modes in a concentrated microemulsion (0.20 < phi < 0.5) due to density (collective diffusion) and concentration or polydispersity (self-diffusion) fluctuations. Below this concentration it was difficult to resolve two exponentials unambiguously, and in this case one apparent relaxation mode was observed. It was found that for a given composition self-diffusion is more pronounced in apparent relaxation mode for a shorter chain length alkane. The concentration dependence of these diffusion coefficients reflects the effect of hard sphere and the supplementary attractive interactions. It was observed that the attractive part becomes more pronounced in the case of a large alkane chain oil at a given temperature. This explains the shift of the region of microemulsion stability to lower temperatures for higher chain length alkanes. Increase in hydrodynamic radius, Rh, obtained from the diffusion coefficient extrapolated to infinite dilution was observed with increase of alkane chain length. The polydispersity in microemulsion systems is dynamic in origin. Results indicate that the time scale for local polydispersity fluctuations is at least 3 orders of magnitude longer than the estimated time between droplet collisions.

Journal Article↗