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Effects of mass inoculation on induced oleoresin response in intensively managed loblolly pine.

Oleoresin flow is an important factor in the resistance of pines to attack by southern pine beetle, Dendroctonus frontalis Zimm., and its associated fungi. Abiotic factors, such as nutrient supply and water relations, have the potential to modify this plant-insect-fungus interaction; however, little is known of the effects of inoculation with beetle-associated fungi on oleoresin flow. We observed that constitutive and induced resin yield in loblolly pine, Pinus taeda L., were affected by either fungal inoculation (with the southern pine beetle-associated fungus Ophiostoma minus (Hedgcock) H. & P. Sydow) or silvicultural treatment. The effects of mass wounding (400 wounds m(-2)) and mass wounding and inoculation with O. minus were assessed by comparison with untreated (control) trees. The treatments were applied to trees in a 2 x 2 factorial combination of fertilizer and irrigation treatments. Fertilization did not significantly affect constitutive resin yield. Even as long as 105 days post-treatment, however, mass-inoculated trees produced higher induced resin yields than control or wounded-only trees, indicating a localized induced response to fungal inoculation. We noted no systemic induction of host defenses against fungal colonization. Although beetles attacking previously attacked trees face a greater resinous response from their host than beetles attacking trees that had not been previously attacked, the effect of an earlier attack may not last more than one flight season. Despite mass inoculations, O. minus did not kill the host trees, suggesting that this fungus is not a virulent plant pathogen.

Animals↗

Allometry and evaluation of in situ optical LAI determination in Scots pine: a case study in Belgium.

We evaluated several optical methods for in situ estimation of leaf area index (LAI) in a Belgian Scots pine (Pinus sylvestris L.) stand. The results obtained were compared with LAI determined from allometric relationships established in the same stand. We found high correlations between branch cross-sectional area, diameter at breast height (DBH) and basal area as dependent variables, and leaf mass, needle area and crown projection as independent variables. We then compared LAI estimated by allometry with LAI determined by three optical methods (LAI-2000, TRAC and digital hemispherical photography) both before and after corrections for blue light scattering, clumping and non-leafy material. Estimates of stand LAI of Scots pine ranged from 1.52 for hemispherical photography to 3.57 for the allometric estimate based on DBH. There was no significant difference (alpha = 0.01) between the allometric LAI estimates and the optical LAI values corrected for blue light scattering, clumping and interception by non-leafy material. However, we observed high sensitivity of the optical LAI estimates to the various conversion factors, particularly to the clumping factor, indicating the need for caution when correcting LAI measured by optical methods.

Belgium↗

Effects of timing of soil frost thawing on Scots pine.

Effects of the timing of soil thawing in the spring on Scots pine (Pinus sylvestris L.) were studied under controlled laboratory conditions. Sixteen 6-year-old saplings were lifted from the field, replanted in containers and placed in four treatments in controlled environment (CE) chambers with four replicate saplings per chamber. The saplings were held in the CE chambers during one simulated winter and one simulated growing season. The soil was frozen to -2 degrees C during a second simulated winter in the CE chambers, and the soil thawing treatments began at the end of the second simulated winter. Soil thawing began at various times before (no delay in thawing) and after (delay in thawing) chamber air conditions were changed from simulated winter to simulated summer. Delayed soil thawing subjected saplings to stress, with the severity of stress depending on the length of the delay in thawing. If there was no delay or only a short delay in soil thawing, stress was minor and reversible. A 2-week delay in soil thawing led to death of the saplings. Stress was apparent as decreases in the variable to maximal chlorophyll fluorescence ratio (Fv/Fm), chlorophyll a/b ratio and needle water potential. In needles of stressed saplings, apoplastic electrical resistance first decreased and then increased and there were anomalies in the electrical impedance spectra of the stems. Stress from the soil thawing treatments affected both root and shoot growth.

Freezing↗

Regeneration patterns in boreal Scots pine glades linked to cold-induced photoinhibition.

Regeneration patterns of Pinus sylvestris L. juveniles in central Siberian glades were studied in relation to cold-induced photoinhibition. Spatial distribution of seedlings in different height classes revealed higher seedling densities beneath the canopy than beyond the canopy, and significantly higher densities of seedlings < 50 cm tall on the north side of the trees. These patterns coincided with differences in light conditions. Compared with plants on the north side of canopy trees (north-exposed), photosynthetic photon flux (PPF) received by plants on the south side of canopy trees (south-exposed) was always higher, making south-exposed plants more susceptible to photoinhibition, especially on cool mornings. Chlorophyll fluorescence data revealed lower photochemical efficiency and increased non-photochemical quenching of small (20-50 cm in height), south-exposed seedlings from spring to early autumn, indicating increased excitation pressure on photosynthesis. Maximum rate of oxygen evolution was less in south-exposed plants than in north-exposed plants. Increased pools of xanthophyll cycle pigments and formation of the photoprotective zeaxanthin provided further evidence for the higher susceptibility to photoinhibition of south-exposed seedlings. A linear mixed model analysis explained many of the physiological differences observed in seedlings according to height class and aspect with early morning temperature and PPF as predictors. The link between photoinhibition and differential distribution of seedlings by height class suggests that photoinhibition, together with other environmental stresses, decreases the survival of small, south-exposed P. sylvestris seedlings, thereby significantly affecting the regeneration pattern of central Siberian pine glades.

Chlorophyll↗

Susceptibility to low-temperature photoinhibition in three conifers differing in successional status.

Susceptibility to photoinhibition of the evergreen conifers Abies alba Mill., Picea abies (L.) Karst. and Pinus mugo Turra was investigated in an unheated greenhouse during winter and spring 2003. Photosynthetic performance of the seedlings was assessed by chlorophyll a fluorescence and analyses of chlorophyll and total carotenoid concentrations in needles. During winter months, maximum quantum yield of PSII photochemistry (ratio of variable to maximum fluorescence, Fv/Fm) was significantly greater in A. alba than in P. abies and P. mugo. Abies alba also sustained higher maximum apparent electron transport rate (ETRmax) than P. abies and P. mugo. Total concentrations of chlorophyll and carotenoids in needles decreased during the winter in P. mugo and P. abies, but remained stable in A. alba. For all species, Fv/Fm decreased from December until February and then increased to a maximum in April. Photoinhibition was greatest (Fv/Fm < 0.80) in all seedlings in February, the month with the lowest mean temperature. Saturating photosynthetic photon flux (PPFsat) and ETRmax were positively related to air temperature. All species had lower values of ETRmax and PPFsat in winter than in spring. Non-photochemical quenching of chlorophyll fluorescence (NPQ) was highest at low air temperatures. Differences among species in susceptibility to winter photoinhibition resulted from their specific light preferences and led to different mechanisms to cope with photoinhibitory stress. The more shade-tolerant A. alba sustained a higher photosynthetic capacity in winter than P. abies and P. mugo. Winter photoinhibition in P. abies, P. mugo and, to a lesser extent, in A. alba may reflect adaptive photoprotection of the photosynthetic apparatus in winter.

Abies↗

Excitation energy partitioning and quenching during cold acclimation in Scots pine.

We studied the influence of two irradiances on cold acclimation and recovery of photosynthesis in Scots pine (Pinus sylvestris L.) seedlings to assess mechanisms for quenching the excess energy captured by the photosynthetic apparatus. A shift in temperature from 20 to 5 degrees C caused a greater decrease in photosynthetic activity, measured by chlorophyll fluorescence and oxygen evolution, in plants exposed to moderate light (350 micromol m(-2) s(-1)) than in shaded plants (50 micromol m(-2) s(-1)). In response to the temperature shift, maximal photochemical efficiency of photosystem II (PSII), measured as the ratio of variable to maximal chlorophyll fluorescence (Fv/Fm) of dark-adapted samples, decreased to 70% in exposed seedlings, whereas shaded seedlings maintained Fv/Fm close to initial values. After a further temperature decrease to -5 degrees C, only 8% of initial Fv/Fm remained in exposed plants, whereas shaded plants retained 40% of initial Fv/Fm. Seven days after transfer from -5 to 20 degrees C, recovery of photochemical efficiency was more complete in the shaded plants than in the exposed plants (87 and 65% of the initial Fv/Fm value, respectively). In response to cold stress, the estimated functional absorption cross section per remaining PSII reaction center increased at both irradiances, but the increase was more pronounced in exposed seedlings. Estimates of energy partitioning in the needles showed a much higher dissipative component in the exposed seedlings at low temperatures, pointing to stronger development of non-photochemical quenching at moderate irradiances. The de-epoxidation state of the xanthophyll cycle pigments increased in exposed seedlings at 5 degrees C, contributing to the quenching capacity, whereas significant de-epoxidation in the shaded plants was observed only when temperatures decreased to -5 degrees C. Thermoluminescence (TL) measurements of PSII revealed that charge recombinations between the second oxidation state of Mn-cluster S2 and the semireduced secondary electron acceptor quinone Q(B)- (S2Q(B)-) were shifted to lower temperatures in cold-acclimated seedlings compared with control seedlings and this effect depended on irradiance. Concomitant with this, cold-acclimated seedlings demonstrated a significant shift in the S2 recombination with primary acceptor Q(A)- (S2Q(A)-) characteristic TL emission peak to higher temperatures, thus narrowing the redox potential gap between S2Q(B)- and S2Q(A)-, which might result in increased probability for non-radiative radical pair recombination between the PSII reaction center chlorophyll a (P680+) and Q(A)- (P680+)Q(A)-) (reaction center quenching) in cold-acclimated seedlings. In Scots pine seedlings, mechanisms of quenching excess light energy in winter therefore involve light-dependent regulation of reaction center content and both reaction center-based and antenna-based quenching of excess light energy, enabling them to withstand high excitation pressure under northern winter conditions.

Acclimatization↗

Seasonality of photosynthetic parameters in a multi-specific and vertically complex forest ecosystem in the Sierra Nevada of California.

Understanding seasonal variations of photosynthetic parameters is critical for accurate modeling of carbon dioxide (CO2) uptake by ecosystems. Maximum carboxylation velocity (Vcmax), maximum rate of electron transport (Jmax), leaf respiration in the light (R(day)), light-saturated assimilation (Amax) and maximum quantum yield (Phi) were calculated from leaf gas exchange measurements made monthly throughout the year on leaves of three co-occuring evergreen species in a Pinus ponderosa Dougl. ex P. Laws. & C. Laws. forest with shrubs in the understory (Arctostaphylos manzanita Parry and Ceanothus cordulatus Kellogg.). The seasonality and relationships of the photosynthetic parameters with environmental and physiological variables differed among the species. The nitrogen-fixing species, C. cordulatus had the highest values of the parameters and the largest seasonal variation, whereas A. manzanita exhibited the lowest seasonality and weaker correlations with environmental variables. In general, variations in Vcmax were highly correlated with light, leaf mass per area and leaf nitrogen content on an area basis. Temporal scaling of the parameters with each other seemed possible for C. cordulatus and P. ponderosa. However, lags between these variables and Vcmax likely reflect the influences of other factors. The acclimation relationships found along vertical light gradients within canopies in other studies cannot be applied to seasonal variations. The Jmax to Vcmax ratio varied seasonally for P. ponderosa and A. manzanita, being lower at high light, high air temperature and low soil water content.

Arctostaphylos↗

A finite element model for investigating effects of aerial architecture on tree oscillations.

A finite element model was developed to study the influence of aerial architecture on the structural dynamics of trees. The model combines a complete description of the axes of the aerial architecture of the plant with numerical techniques suitable for dynamic nonlinear analyses. Trees were modeled on the basis of morphological measurements that were previously made on three 4-year-old Pinus pinaster Ait. saplings originating from even-aged stands. Calculated and measured oscillations were compared to evaluate model behavior. The computations allowed the characteristics of the fundamental mode of vibration to be estimated with satisfactory accuracy. Inclusion of a topological description of the aerial system in a mechanical model provided insight into the effect of tree architecture on tree dynamic behavior. Simplifications of the branching pattern in the model led to overestimations of the natural swaying frequency of saplings by 10 to 20%. Inadequate values of stem and root anchorage stiffness resulted in errors of 10 to 20%. Modeling results indicated that aerodynamic drag of needles is responsible for 80% of the damping in the studied trees. Additionally, damping of stem movement is reduced by one half when branch oscillations are not considered. It appears that the efficiency of the dissipative mechanisms depends directly on crown topology.

Biomechanical Phenomena↗

Biomass and biomass change in lodgepole pine stands in Alberta.

We describe methods and results for broad-scale estimation and mapping of forest biomass for the Canadian province of Alberta. Differences over successive decades provided an estimate of biomass change. Over 1500 permanent sample plots (PSP) were analyzed from across the range of lodgepole pine (Pinus contorta var. latifolia Engelm.), the major forest tree species of Alberta. The PSP network is densest in stands aged between 70 and 100 years and is well-represented by stands of all ages to 150 years of age. Stand biomass (Mg ha(-1)) was estimated for each PSP plot as the sum of the respective biomass components for each tree (live and standing dead). The biomass components for live trees were stem, bark, branches, foliage and roots. The components for standing dead trees excluded foliage. Equations from previous biomass studies were used for biomass component estimation. Biomass estimates of additional non-tree components were attempted, but without much success. Biomass of the soil organic layer was estimated once on 452 PSPs and a mean estimate of total dead fuels on the ground (28.4 Mg ha(-1)) was available only for the entire distribution of lodgepole pine. However, values of these two components were essentially constant over time and therefore did not alter the analysis or conclusions obtained by analyzing total tree biomass alone. We then used this spatial network of 1549 plots as the basis for mapping biomass across Alberta. Mapping methods were based on Australian National University SPLINe (ANUSPLIN) software, Hutchinson's thin-plate smoothing spline in four dimensions (latitude, longitude, elevation and biomass). Total tree biomass (mean = 172 Mg ha(-1)) was dominated by stem biomass (mean = 106 Mg ha(-1)), which was an order of magnitude greater than the mean estimates for the bark (11 Mg ha(-1)), branch (12 Mg ha(-1)) and foliage (12 Mg ha(-1)) components. A close relationship was found between total tree biomass and stand stem volume (R(2) = 0.992 with n = 3585; note that volume and biomass were calculated independently). We compared total tree biomass for two decades, the 1980s and the 1990s. After correcting for changes in harvest removals over time, the mean change in total biomass was positive (0.99 Mg ha(-1) year(-1)) and differed significantly from zero (n = 421; P < 0.001). Estimates ranged from -13.9 to 8.0 Mg ha(-1) year(-1). The heart of the lodgepole pine distribution (primarily the Foothills subregions) showed an increase in biomass, whereas isolated pockets of lodgepole pine in the boreal northern subregion indicated a decline in biomass.

Alberta↗

Influences of canopy photosynthesis and summer rain pulses on root dynamics and soil respiration in a young ponderosa pine forest.

Our first objective was to link the seasonality of fine root dynamics with soil respiration in a ponderosa pine (Pinus ponderosa P. & C. Lawson) plantation located in the Sierra Nevada of California. The second objective was to examine how canopy photosynthesis influences fine root initiation, growth and mortality in this ecosystem. We compared CO2 flux measurements with aboveground and belowground root dynamics. Initiation of fine root growth coincided with tree stem thickening and shoot elongation, preceding new needle growth. In the spring, root, shoot and stem growth occurred simultaneously with the increase in canopy photosynthesis. Compared with the other tree components, initial growth rate of fine roots was the highest and their growing period was the shortest. Both above and belowground components completed 90% of their growth by the end of July and the growing season lasted approximately 80 days. The period for optimal growth is short at the study site because of low soil temperatures during winter and low soil water content during summer. High photosynthetic rates were observed following unusual late-summer rains, but tree growth did not resume. The autotrophic contribution to soil respiration was 49% over the whole season, with daily contributions ranging between 18 and 87%. Increases in soil and ecosystem respiration were observed during spring growth; however, the largest variation in soil respiration occurred during summer rain events when no growth was observed. Both the magnitude and persistence of the soil respiration pulses were positively correlated with the amount of rain. These pulses accounted for 16.5% of soil respiration between Days 130 and 329.

Carbon Dioxide↗

Dark respiration rate increases with plant size in saplings of three temperate tree species despite decreasing tissue nitrogen and nonstructural carbohydrates.

In shaded environments, minimizing dark respiration during growth could be an important aspect of maintaining a positive whole-plant net carbon balance. Changes with plant size in both biomass distribution to different tissue types and mass-specific respiration rates (R(d)) of those tissues would have an impact on whole-plant respiration. In this paper, we evaluated size-related variation in R(d), biomass distribution, and nitrogen (N) and total nonstructural carbohydrate (TNC) concentrations of leaves, stems and roots of three cold-temperate tree species (Abies balsamea (L.) Mill, Acer rubrum L. and Pinus strobus L.) in a forest understory. We sampled individuals varying in age (6 to 24 years old) and in size (from 2 to 500 g dry mass), and growing across a range of irradiances (from 1 to 13% of full sun) in northern Minnesota, USA. Within each species, we found small changes in R(d), N and TNC when comparing plants growing across this range of light availability. Consistent with our hypotheses, as plants grew larger, whole-plant N and TNC concentrations in all species declined as a result of a combination of changes in tissue N and shifts in biomass distribution patterns. However, contrary to our hypotheses, whole-plant and tissue R(d) increased with plant size in the three species.

Abies↗

Differential light responses of Mediterranean tree saplings: linking ecophysiology with regeneration niche in four co-occurring species.

The ecophysiological mechanisms underlying plant-plant interactions and forest regeneration processes in Mediterranean ecosystems are poorly understood, and the experimental evidence for the role of light availability in these processes is particularly scant. We analyzed the effects of high and low irradiances on 31 ecological, morphological and physiological variables in saplings of four late-successional Mediterranean trees, two deciduous (Acer opalus subsp. granatense (Boiss.) Font Quer & Rothm. and Quercus pyrenaica Willd.) and two evergreen (Pinus nigra Arnold subsp. salzmannii (Dunal) Franco and Quercus ilex L.), which coexist in mature montane forests. Species differed in both their capacity to withstand high radiation and in their shade tolerance. The two deciduous species were the least tolerant to high radiation, exhibiting both dynamic and chronic photoinhibition in full sunlight, with severe implications for gas exchange and photosynthetic performance. Excess light severely limited the survival of A. opalus subsp. granatense, even minor reductions of excessive radiation (from full sunlight to 80% sunlight) being crucial for sapling survival. Among species, P. nigra was the most tolerant of high irradiances but showed the poorest shade acclimation. Interspecific differences in the mechanisms of response to light provide a partial explanation of the differential regeneration patterns previously reported for these species, with shade-tolerant plants (i.e., deciduous broadleaf species) benefiting the most from associations with nurse plants. We conclude that light availability is an important environmental factor defining the regeneration niche of Mediterranean woody species.

Acer↗

Plant size, not age, regulates growth and gas exchange in grafted Scots pine trees.

We studied the effect of scion donor-tree age on the physiology and growth of 6- to 7-year-old grafted Scots pine (Pinus sylvestris L.) trees (4 and 5 years after grafting). Physiological measurements included photosynthethetic rate, stomatal conductance, transpiration, whole plant hydraulic conductance, needle nitrogen concentration and carbon isotope composition. Growth measurements included total and component biomasses, relative growth rates and growth efficiency. Scion donor trees ranged in age from 36 to 269 years at the time of grafting. Hydraulic conductance was measured gravimetrically, applying the Ohm's law analogy, and directly, with a high-pressure flow meter. We found no effect of scion donor-tree age on any of the variables measured. There was, however, great variation within scion donor-tree age groups, which was related to the size of the grafted trees. Differences in size may have been caused by variable initial grafting success, but there was no indication that grafting success and age were related. At the stem level, hydraulic conductance scaled with total leaf area so that total conductance per unit leaf area did not vary with crown size. However, leaf specific hydraulic conductance (gravimetric), transpiration, photosynthesis and stomatal conductance declined with increasing total tree leaf area and needle width. We hypothesize that needle width is inversely related to mesophyll conductance. We conclude that canopy and needle size and not scion donor-tree age determined gas exchange in our grafted trees.

Pinus sylvestris↗

Pathogen challenge, salicylic acid, and jasmonic acid regulate expression of chitinase gene homologs in pine.

To better understand the molecular regulation of defense responses in members of the genus Pinus, we tested the expression of various chitinase homologs in response to pathogen-associated signals. PSCHI4, a putative extracellular class II chitinase, was secreted into liquid medium by pine cells and was also secreted by transgenic tobacco cells that ectopically expressed pschi4. Extracellular proteins of pine were separated by isoelectric focusing; PSCHI4 was not associated with fractions containing detectable beta-N-acetylglucosaminidase or lysozyme activities. However, other fractions contained enzyme activities that increased markedly after elicitor treatment. The pschi4 transcript and protein accumulated in pine seedlings challenged with the necrotrophic pathogen Fusarium subglutinans f. sp. pini, with the protein reaching detectable levels in susceptible seedlings concomitant with the onset of visible disease symptoms. Additional chitinase transcripts, assigned to classes I and IV based on primary sequence analysis, were also induced by pathogen challenge. Jasmonic acid induced class I and class IV but not class II chitinase, whereas salicylic acid induced all three classes of chitinase. These results show that multiple chitinase homologs are induced after challenge by a necrotrophic pathogen and by potential signaling molecules identified in angiosperms. This suggests the potential importance of de novo pathogenesis-related (PR) gene expression in pathogen defense responses of pine trees.

Amino Acid Sequence↗

Nonmycorrhizal (myc-) mutants of Hebeloma cylindrosporum obtained through insertional mutagenesis.

Polyethylene glycol-mediated transformation of protoplasts was used as a method for insertional mutagenesis to obtain mutants of the ectomycorrhizal fungus Hebeloma cylindrosporum impaired in symbiotic ability. Following restriction enzyme-mediated integration or conventional plasmid insertion, a library of 1,725 hygromycin-resistant monokaryotic transformants was generated and screened for the symbiotic defect, using Pinus pinaster seedlings as host plants. A total of 51 transformants displaying a dramatically reduced mycorrhizal ability were identified. Among them, 29 were nonmycorrhizal (myc-), but only 10 of them had integrated one or several copies of the transforming plasmid in their genome. Light and scanning electron microscopy observations of pine roots inoculated with myc- mutants suggested that we selected mutants blocked at early stages of interaction between partners or at the stage of Hartig net formation. Myc- mutants with plasmid insertions were crossed with a compatible wild-type monokaryon and allowed to fruit. Monokaryotic progenies were obtained in three independent crosses and were analyzed for symbiotic activity and plasmid insertion. In all three progenies, a 1:1 myc-:myc+ segregation ratio was observed, suggesting that each myc- phenotype resulted from a single gene mutation. However, for none of the three mutants, the myc- phenotype segregated with any of the plasmid insertions. Our results support the idea that master genes, the products of which are essential for symbiosis establishment, do exist in ectomycorrhizal fungi.

Basidiomycota↗

Plant-plant interactions vary with different mycorrhizal fungus species.

Because different species of mycorrhizal fungi have different effects on the growth of particular plant species, variation in mycorrhizal fungus species composition could cause changes in the strength of plant-plant interactions. Results are presented from a growth chamber experiment that compared the strength of interactions among seedlings of ponderosa pine (Pinus ponderosa) when the pines were colonized by two different groups of ectomycorrhizal fungi in the genus Rhizopogon. Plant density effects differed between the two groups of mycorrhizal fungi: plant growth was low regardless of density when plants were colonized with pine-specific Rhizopogon species, while plant growth declined with plant density when plants were colonized by Rhizopogon species having a broader host range. This result parallels results from previous studies showing that plant interactions are more antagonistic with mycorrhizal fungi than without, implying that plant responsiveness to beneficial mycorrhizal fungi declines with increasing plant density. If such effects are prevalent in plant communities, then variation in mycorrhizal fungus community composition is predicted to have a density-dependent effect on plants.

Mycorrhizae↗

Regional heterogeneity and gene flow maintain variance in a quantitative trait within populations of lodgepole pine.

Genetic variation is of fundamental importance to biological evolution, yet we still know very little about how it is maintained in nature. Because many species inhabit heterogeneous environments and have pronounced local adaptations, gene flow between differently adapted populations may be a persistent source of genetic variation within populations. If this migration-selection balance is biologically important then there should be strong correlations between genetic variance within populations and the amount of heterogeneity in the environment surrounding them. Here, we use data from a long-term study of 142 populations of lodgepole pine (Pinus contorta) to compare levels of genetic variation in growth response with measures of climatic heterogeneity in the surrounding region. We find that regional heterogeneity explains at least 20% of the variation in genetic variance, suggesting that gene flow and heterogeneous selection may play an important role in maintaining the high levels of genetic variation found within natural populations.

Climate↗

Testing hypotheses of Pleistocene population history using coalescent simulations: phylogeography of the pygmy nuthatch (Sitta pygmaea).

In this paper, we use mitochondrial NADH dehydrogenase subunit 2 sequences to test Pleistocene refugial hypotheses for the pygmy nuthatch (Sitta pygmaea). Pygmy nuthatches are a common resident of long-needle pine forests in western North America and demonstrate a particular affinity with ponderosa pine (Pinus ponderosa). Palaeoecological and genetic data indicate that ponderosa pine was isolated in two Pleistocene refugia corresponding to areas in the southern Sierra Nevada in the west and southern Arizona and New Mexico in the east. We use coalescent simulations to test the hypothesis that pygmy nuthatches tracked the Pleistocene history of their preferred habitat and persisted in two refugia during the periods of glacial maxima. Coalescent simulation of population history does not support the hypothesis of two Pleistocene refugia for the pygmy nuthatch. Instead, our data are consistent with a single refuge model. Nucleotide diversity is greatest in the western populations of southern and coastal California. We suggest that the pygmy nuthatch expanded from a far western glacial refuge into its current distribution since the most recent glacial maximum.

Animals↗