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Stable fly, house fly (Diptera: Muscidae), and other nuisance fly development in poultry litter associated with horticultural crop production.

Poultry litter usage in horticultural crop production is a contributor to nuisance fly populations, in particular stable flies (Stomoxys calcitrans L.) and house flies (Musca domestica L.). Extrapolation of adult emergence data suggests that approximately 1.5 million house flies and 0.2 million stable flies are emerging on average from every hectare of poultry litter applied as a preplant fertilizer for vegetable production in Perth, Western Australia. To a lesser extent, sideband applications to established crops may allow for the development of 0.5 million house flies and 45,000 stable flies per hectare. However, up to 1 million house flies, 0.45 million lesser house flies, Fannia cannicularis L., and 11,000 stable flies per hectare may be produced from surface dressings of poultry litter associated with turf production. Other nuisance flies present in poultry litter included the false stable fly, Muscina stabulans (Fallén), bluebodied blowfly, Calliphora dubia Hardy, black carrion fly, Hydrotaea rostrata Robineau-Desvoidy, Australian sheep blowfly, Lucilia cuprina Wiedemann, and flesh flies (Sarcophagidae). Only house flies developed in poultry litter for the first 4 d after application in the field. Stable flies were not present in poultry litter until 4-7 d after application, and were the only fly species developing in litter > 9 d after application.

Agriculture↗

Strategies for biological system management of nematodes in horticultural crops: fumigate, confuse or ignore them.

Integrated management of nematodes as well as other soil-borne pests and diseases in horticultural crops in the tropics and subtropics as well as in protected cultivation in temperate climates is often a lopsided approach based on soil fumigation. With the upcoming loss of methyl bromide (Mbr), because of its effects on the ozone layer of the atmosphere, growers will have to make changes in the way they look at the problem of controlling soil-borne nematodes, fungi, insects and weeds. They can no longer rely on eradication of all pest problems with a one-stroke fumigation process. This is a severe problem that requires sound scientific solutions. New control technologies need to be developed and established methods urgently refined that are acceptable to the growers. Alternative fumigants and systemic nematicides still on the market will not provide broad spectrum control equal to Mbr. More disturbing is a provocative statement made by an economist that due to pesticides nematologists have neglected developing suitable alternative IPM measures of control. Some people may agree with this statement, especially if they are not involved in soil-ecosystem research. If you are a nematologist, this thought-provoking statement is at first upsetting but it is not valid. My talk will concentrate on the biological and cultural control methodologies that have been developed by nematologist around the world for use in management systems. These are technologies that can compensate for the loss of methyl bromide to horticultural crops in many countries. Alternatives are available and new methodologies are being developed for restructuring IPM strategies in many crops. The compatibility of these new approaches with general farming practices needs to be assessed on a country by country basis. Mutually interacting technology packages are needed, that are logically structured in "biological system management" programs that stress biocontrol aspects of control and not pesticides as is often the case in standard IPM approaches.

Animals↗

Starch grains reveal early root crop horticulture in the Panamanian tropical forest.

Native American populations are known to have cultivated a large number of plants and domesticated them for their starch-rich underground organs. Suggestions that the likely source of many of these crops, the tropical forest, was an early and influential centre of plant husbandry have long been controversial because the organic remains of roots and tubers are poorly preserved in archaeological sediments from the humid tropics. Here we report the occurrence of starch grains identifiable as manioc (Manihot esculenta Crantz), yams (Dioscorea sp.) and arrowroot (Maranta arundinacea L.) on assemblages of plant milling stones from preceramic horizons at the Aguadulce Shelter, Panama, dated between 7,000 and 5,000 years before present (BP). The artefacts also contain maize starch (Zea mays L.), indicating that early horticultural systems in this region were mixtures of root and seed crops. The data provide the earliest direct evidence for root crop cultivation in the Americas, and support an ancient and independent emergence of plant domestication in the lowland Neotropical forest.

Agriculture↗

Derivation of ozone flux-yield relationships for lettuce: a key horticultural crop.

Ozone flux-response relationships were derived for lettuce, employing a multiplicative approach to model the manner in which stomatal conductance is influenced by key environmental variables, using a dataset collected during field experimentation in Crete and yield-response relationships derived from parallel open-top chamber experiments. Regional agronomic practices were adopted throughout. Computed versus measured data revealed that the derived model explained 51% (P<0.001) of the observed variation in stomatal conductance. Concentration-based indices were compared with flux-based indices. Analyses revealed a significant relationship between accumulated stomatal ozone flux and yield employing flux threshold cut-offs up to 4 nmol m(-2) s(-1). Regressions employing very low or zero flux thresholds resulted in the strongest yield-flux relationships (explaining approximately 80% (P<0.05) of the variation in the dataset).

Crops, Agricultural↗

Benzene accumulation in horticultural crops.

In this study apple, blackberry and cucumber crops were exposed to elevated levels of benzene under controlled conditions. Benzene was retained in fruits of all crops, but only accumulated in leaves of blackberries and apples. The retention by cucumber fruits is suggested to result from the longer pathway for the desorption of benzene as a consequence of their increased tissue depth compared to leaves. The process of accumulation in blackberry and apple leaves is unknown. The ingestion of benzene via the food-chain pathway on the basis of this study is concluded not to be significant.

Benzene↗

Molecular characterization of Legionella populations present within slow sand filters used for fungal plant pathogen suppression in horticultural crops.

The total bacterial community of an experimental slow sand filter (SSF) was analyzed by denaturing gradient gel electrophoresis (DGGE) of partial 16S rRNA gene PCR products. One dominant band had sequence homology to Legionella species, indicating that these bacteria were a large component of the SSF bacterial community. Populations within experimental and commercial SSF units were studied by using Legionella-specific PCR primers, and products were studied by DGGE and quantitative PCR analyses. In the experimental SSF unit, the DGGE profiles for sand column, reservoir, storage tank, and headwater tank samples each contained at least one intense band, indicating that a single Legionella strain was predominant in each sample. Greater numbers of DGGE bands of equal intensity were detected in the outflow water sample. Sequence analysis of these PCR products showed that several Legionella species were present and that the organisms exhibited similarity to strains isolated from environmental and clinical samples. Quantitative PCR analysis of the SSF samples showed that from the headwater sample through the sand column, the number of Legionella cells decreased, resulting in a lower number of cells in the outflow water. In the commercial SSF, legionellae were also detected in the sand column samples. Storing prefilter water or locating SSF units within greenhouses, which are often maintained at temperatures that are higher than the ambient temperature, increases the risk of growth of Legionella and should be avoided. Care should also be taken when used filter sand is handled or replaced, and regular monitoring of outflow water would be useful, especially if the water is used for misting or overhead irrigation.

Crops, Agricultural↗

Evaluating an interpolation approach for modelling spatial variability in pest development.

Air temperatures estimated by partial thin plate spline interpolation, or from the 'nearest station' (Voronoi polygon method), were used to model the phenology of three pests of horticultural crops throughout England and Wales. Temperatures for a particularly hot (1976) and a particularly cold (1986) year were interpolated to a grid resolution of 1 km. Estimates were made of the timing of spring emergence (Cecidophyopsis ribis (Westwood)), the maximum number of generations completed during the summer (Plutella xylostella (Linnaeus)) and the numbers of days when mating was possible (Merodon equestris (Fabricius)). The relative accuracy of the two temperature estimation methods was compared using jack-knife cross-validation. For C. ribis and P. xylostella, modelling with interpolated temperature input data was more accurate than using data from the 'nearest station'. Of the three phenology models used, the one that relied on an activity threshold (M. equestris) was the most sensitive to both types of input data. Spatial variability in the activity of M. equestrisadults was investigated in the two main areas (south-west peninsula and Lincolnshire) where its host crop (Narcissus) is grown. Modelling at cruder scales (up to 25*25 km) masked local variation, but the degree to which this was important varied from region to region and over time, as did the geography of the variability itself. The results indicate that interpolated data, computed to a resolution of 1 km using the UK synoptic network, have the potential for wider use within agricultural decision support systems for horticultural crops.

Animals↗

A novel biocontrol Pseudomonas species with broad-spectrum antagonistic activity against phytopathogens.

Bacterial and fungal diseases cause significant losses in horticultural crops, and biocontrol using beneficial microorganisms offers a sustainable alternative to chemical pesticides. In this study, a novel Pseudomonas strain D3 was isolated from Actinidiae rhizosphere. D3 exhibited strong antibacterial activity in LB medium but showed no activity against fungi or oomycetes. However, when cultured in KIDO medium, it demonstrated potent antifungal activity. Phylogenetic analysis based on 16S rRNA gene showed that D3 was most closely related to Pseudomonas mosselii CIP_105259T, while whole-genome sequencing revealed ANI values below 95% with eight known P. mosselii strains. Digital DNA-DNA hybridization (dDDH) further confirmed its genomic distinctiveness, with the highest dDDH value (58.2%) against the type strain P. mosselii DSM 17497T, well below the 70% species delineation threshold, supporting D3 as a novel Pseudomonas species. Functional validation via targeted gene knockout revealed a dichotomy in the antagonistic mechanisms of D3. Knockout of individual biosynthetic gene clusters (BGCs) only partially reduced antibacterial activity against Pseudomonas syringae pv. actinidiae, indicating that multiple BGCs contribute to this activity in a partially redundant manner. In contrast, disruption of a specific lipopeptide synthase cluster completely abolished antifungal activity against Valsa mali. LC-MS/MS analysis confirmed that this lipopeptide was produced exclusively in KIDO medium, consistent with the observed medium-dependent antifungal activity. Detached leaf and twig assays showed that D3 provides strong preventive biocontrol against both pathogens. Collectively, strain D3 employs a dual biocontrol mechanism, combining antibacterial activity mediated by multiple BGCs with lipopeptide-dependent antifungal activity, positioning it as a promising agent for sustainable disease management in horticultural crops.

Pseudomonas↗

Genome editing research initiatives and regulatory landscape of genome edited crops in India.

Food and nutritional security are the top priorities in Indian agriculture. Exponential population growth coupled with climate change effects has become a serious challenge for sustainable agriculture. Genome editing has revolutionized the agricultural sector because of its ability to create precise, stable and predictable modifications in the genome and therefore, offers great opportunities for crop improvement in India. However, for harvesting the real benefits of this technology in agriculture sector, there is a strong need of creating awareness among the end users and development of suitable policies for regularization of genome edited products. Many regulatory agencies around the world have been modernizing their regulatory approaches to be more risk proportionate and to reflect a more science-based approach. In this article, recent research initiatives and developments undertaken by different Indian institutes/organizations for the genetic improvement of agricultural and horticultural crops via genome editing technologies are summarized. Furthermore, to benefit from this potential technology in our country, regulatory policies must be clear, science-based and proportionate. Therefore, in the present review, the regulatory policies related to the genome editing of crop products in India are discussed in detail. This review will sensitize researchers and stakeholders to the application of genome editing techniques in crop improvement and various biosafety committees involved in the development and regulation of genome edited crops.

Crops, Agricultural↗

Quantification of imidacloprid uptake in maize crops.

The systemic imidacloprid is one of the most used insecticides in the world for field and horticultural crops. This neurotoxicant is often used as seed-dressing, especially for maize, sunflower, and rape. Using a LC/MS/MS technique (LOQ = 1 microg/kg and LOD = 0.1 microg/kg), the presence of imidacloprid has been measured in maize from field samples at the time of pollen shed, from less than 0.1 microg/kg up to 33.6 microg/kg. Numerous random samples were collected throughout France from 2000 to 2003. The average levels of imidacloprid measured are 4.1 microg/kg in stems and leaves, 6.6 microg/kg in male flowers (panicles), and 2.1 microg/kg in pollen. These values are similar to those found previously in sunflower and rape. These results permit evaluation of the risk to honeybees by using the PEC/PNEC ratios (probable exposition concentrations/predicted no effect concentration). PEC/PNEC risk ratios were determined and ranged between 500 and 600 for honeybees foraging on maize treated with imidacloprid by seed dressing. Such a high risk factor can be related to one of the main causes of honeybee colony losses.

Flowers↗

Glufosinate (phosphinothricin), a natural amino acid with unexpected herbicidal properties.

Glufosinate ammonium (phosphinothricin ammonium) (GLA) is the active ingredient of Basta and several other herbicides used worldwide. It is produced as part of the tripeptide L-phosphinothricyl-L-alanyl-L-alanin, which was first isolated from Streptomyces viridichromogenes or Streptomyces hygroscopicus. Its structure is confirmed by degradation and synthesis. Several processes for the preparation of D,L- and L-phosphinothricin are described. Glufosinate is a structural analog of glutamate and inhibits the glutamine synthetase. The result is a rapid build-up of a high ammonia level and a concomitant depletion of glutamine and several other amino acids in the plant. These effects are accompanied by a rapid decline of photosynthetic CO2-fixation and are followed by chlorosis and desiccation. The results of numerous toxicological studies show that glufosinate ammonium and its commercial formulations are safe for users and consumers under the conditions of recommended use. The fast and complete degradation in soil and surface water prevents movement of residues into groundwater. The toxicological threshold levels for all the nontarget organisms tested are well above the potential exposure levels and therefore do not reflect any hazard for nontarget organisms in the ecosystem. Basta is a nonselective foliar applied herbicide for the control of undesirable mono- and dicotyledonous plants in orchards, vineyards, and plantations for minimum tillage, and as a harvest aid. A synthetic phosphinothricin acetyltransferase (PAT) gene has been introduced via Agrobacterium tumefaciens into dicot crops, such as like tobacco, tomato, spring and winter rapeseed, alfalfa, and several horticultural crops. The PAT gene was also successfully introduced into maize protoplasts that could be regenerated into fertile plants. All transgenic crop plants tolerated a two- to threefold field dosage of Basta.

Agrochemicals↗

Crop damage and livestock depredation by wildlife: a case study from Nanda Devi Biosphere Reserve, India.

The success of conserving biological resources in any Biosphere Reserve or protected area depends on the extent of support and positive attitudes and perceptions of local people have towards such establishments. Ignoring the dependence of the local people for their subsistence needs on resources of such areas leads to conflicts between protected area managers and the local inhabitants. Crop yield losses and livestock depredation were serious problems observed in most buffer zone villages of Nanda Devi Biosphere Reserve. In the present study 10 villages situated in the buffer zone of Nanada Devi Biosphere Reserve (1612 km2 area) in Chamoli district of Uttaranchal, India were studied during 1996-97 using a questionnaire survey of each household (419 = households; 2253 = total population in 1991; 273 ha = cultivated area). Estimates of crop yield losses were made using paired plots technique in four representative villages for each crop species. The magnitude of crop yield losses varied significantly with the distance of agricultural field from forest boundary. The total crop yield losses were high for wheat and potato in all the villages. The spatial distribution of total crop yield losses in any village indicated that they were highest in the area near to forest and least in the area near to village for all crops. Losses from areas near to forest contributed to more than 50% of total losses for each crop in all villages. However, in Lata, Peng and Tolma villages, the losses are high for kidney bean and chemmi (local variety of kidney bean) which varied between 18.5% to 30% of total losses in those villages. Potato alone represents 43.6% of total crop yield loss due to wildlife in Dronagiri village in monetary terms. Among the crops, the monetary value of yield losses are least for amaranth and highest for kidney bean. The projected total value of crop yield losses due to wildlife damage for buffer zone villages located in Garhwal Himalaya is about Rs. 538,620 (US$ 15,389). Besides food grains, horticultural crops i.e. apple, also suffered maximum damage. Major wildlife agents responsible for crop damage were wild boar, bear, porcupine, monkey, musk deer and partridge (chokor). Monkey and wild boar alone accounted for about 50% to 60% of total crop damage in the study villages. Goat and sheep are the major livestock killed by leopard. The total value of livestock losses at prevailing market rates is about Rs. 1,024,520 (US$ 29,272) in the study villages. Due to existing conservation policies and laxity in implementation of preventive measures, the problems for local inhabitants are increasing. Potential solutions discussed emphasize the need to undertake suitable and appropriate protective measures to minimize the crop losses. Change in cropping and crop composition, particularly cultivation of medicinal plants (high value low volume crops), were also suggested. Besides, fair and quick disbursement of compensation for crop loss and livestock killing need to be adopted. Local people of the buffer zone area already have a negative attitude towards park/reserve establishment due to socio-political changes inducing major economic losses and this attitude may lead to clashes and confrontations if proper ameliorative measures are not taken immediately.

Agriculture↗

The ecology and epidemiology of whitefly-transmitted viruses in Latin America.

Whitefly-transmitted geminiviruses are the most important constraint to the production of common bean and vegetable crops in the tropical lowlands and mid-altitude valleys of Latin America. Currently, over 30 distinct species of geminiviruses that are transmitted by the whitefly Bemisia tabaci infect common bean, tomato, pepper, cucurbits and other horticultural crops. A climate probability model (using FloraMap) was obtained using data from 304 geo-referenced locations where B. tabaci and geminiviruses cause significant damage. Clustering of the 304 points produced a simple model with two climatic variables: a dry season of at least 4 months each with less than 80 mm of rain and a mean temperature of the hottest month exceeding 21 degrees C. A modified Koeppen climate classification showed that 55% of the geminivirus-affected localities are in the tropical wet/dry region, 22% in the tropical and subtropical dry/humid climates and the remaining locations belonged to the wet equatorial and trade wind litoral climates. These findings contribute to understanding whitefly/geminivirus epidemics and implementation of sustainable integrated pest and disease management practices.

Animals↗

Microspore-derived embryogenesis in pepper (Capsicum annuum L.): subcellular rearrangements through development.

Background information. In vitro-cultured microspores, after an appropriate stress treatment, can switch towards an embryogenic pathway. This process, known as microspore embryogenesis, is an important tool in plant breeding. Basic studies on this process in economically interesting crops, especially in recalcitrant plants, are very limited and the sequence of events is poorly understood. In situ studies are very convenient for an appropriate dissection of microspore embryogenesis, a process in which a mixture of different cell populations (induced and non-induced) develop asynchronically.Results. In the present study, the occurrence of defined subcellular rearrangements has been investigated during early microspore embryogenesis in pepper, an horticultural crop of agronomic interest, in relation to proliferation and differentiation events. Haploid plants of Capsicum annuum L. (var. Yolo Wonder B) have been regenerated from in vitro anther cultures by a heat treatment at 35 degrees C for 8 days. Morphogenesis of microspore-derived embryos has been analysed, at both light and electron microscopy levels, using low-temperature-processed, well-preserved specimens. The comparison with the normal gametophytic development revealed changes in cell organization after embryogenesis induction, and permitted the characterization of the time sequence of a set of structural events, not previously defined in pepper, related to the activation of proliferative activity and differentiation. These changes mainly affected the plastids, the vacuolar compartment, the cell wall and the nucleus. Further differentiation processes mimicked that of the zygotic development.Conclusions. The reported changes can be considered as markers of the microspore embryogenesis. They have increased the understanding of the mechanisms controlling the switch and progression of the microspore embryogenesis, which could help to improve its efficiency and to direct strategies, especially in agronomically interesting crops.

Capsicum↗

Tropical Whitefly IPM Project.

The Tropical Whitefly IPM Project (TWFP) is an initiative of the Systemwide IPM Programme of the Consultative Group on International Agricultural Research (CGIAR), financed by the Department for International Development (DFID) of the United Kingdom, the Danish International Development Agency (DANIDA), the United States Department of Agriculture (USDA) and Agency for International Development (USAID), the Australian Centre for International Agricultural Research (ACIAR), and the New Zealand Agency for International Development (NZAID), to manage whitefly pests and whitefly-transmitted viruses in the Tropics. Participating CGIAR and other international centers include the Centre for International Tropical Agriculture (CIAT); the International Institute of Tropical Agriculture (IITA); The International Potato Centre (CIP); the Asian Vegetable Research and Development Centre (AVRDC); and the International Centre of Insect Physiology and Ecology (ICIPE), in close collaboration with the National Resources Institute (NRI-UK); national agricultural research institutions; agricultural universities; and advanced agricultural research laboratories in Africa, Asia, Europe, the Pacific Region, and the Americas. The TWFP was launched in 1996 as five separate but closely linked subprojects targeting: (1) Bemisia tabaci as a vector of viruses affecting cassava and sweet potato in sub-Saharan Africa (IITA, NRI, CIP, CIAT); (2) B. tabaci as a vector of viruses in mixed cropping systems of Mexico, Central America, and the Caribbean (CIAT); (3) B. tabaci as a vector of viruses in mixed cropping systems of eastern and southern Africa (ICIPE, AVRDC); (4) B. tabaci as a vector of viruses in mixed cropping systems of Southeast Asia (AVRDC); (5) Trialeurodes vaporariorum as a pest in mixed cropping systems of the Andean highlands (CIAT); and (6) whiteflies as pests of cassava in South America (CIAT). Diagnostic surveys conducted in Phase I (1997-2000) clearly showed that the two main whitefly pests in the Tropics are B. tabaci and, in the highlands, T. vaporariorum. Other whitefly species investigated by the TWFP included B. afer and Aleurotrachelus socialis. B. tabaci is the main vector of plant viruses inducing African cassava mosaic disease, sweet potato virus disease, bean golden mosaic disease, and many other diseases of horticultural crops, mainly tomato, hot and sweet peppers, squash, melon, and several other cucurbits. Genetic resistance was identified as the most important component of an IPM programme, followed by phytosanitary, cultural and legal measures. The two most important factors contributing to whitefly/virus epidemics were shown to be pesticide abuse and the use of virus-infected planting materials. Biological control is only effective in cropping systems with minimal or rational use of insecticides, and should be considered only as a complementary IPM strategy. Farmer education and technical assistance are considered the most critical steps toward the implementation of sustainable and economically viable IPM strategies in tropical countries affected by whitefly pests and whitefly-transmitted viruses.

Animals↗

Potential operator exposure to procymidone in greenhouses.

Recent legislation in the European Union requires regulators of member states to carry out risk assessments using data for actual or potential operator exposure, or estimates of exposure from models. However, the existing models have few datasets from studies carried out on greenhouse or indoor crops, particularly in southern Europe. In this study potential dermal and inhalatory exposures were measured in two trials in Italian greenhouses. The total potential dermal operator exposure of the applicator, measured with a whole-body passive dosimetry method, was 15.4 and 37.1 mL/h of the diluted pesticide mixture. The majority of the contamination was on the hands and on the lower part of the coverall. Approximately 0. 003% of the active ingredient (ai) applied to the crop area contaminated the coverall worn by the operator. The potential dermal exposure during the mixing and loading phase accounted for 6-8% of the total potential dermal exposure during the whole process. Inhalation exposure accounted for only 0.05-0.07% of the total potential operator exposure. Model predictions of the potential operator exposure using a modified version of the German model overestimate the mixing-loading exposure while underestimating the application exposure. These data are evidence that the estimation coefficient set for hand-held application to ornamental and horticultural crops may be inadequate for the agronomic conditions of southern Europe.

Agriculture↗

Life without methyl bromide: the Italian experience in replacing the fumigant.

Methyl bromide (MB) has been the most widely used chemical for the fumigation of soil, commodities, buildings and furniture for over seventy years. Since January 1st 2005, it has been phased-out in industrialized countries, where only critical uses are allowed, because of international regulatory measures designed to reduce substances that potentially deplete the stratospheric ozone layer. Italy ranked second in the world, after USA, in MB consumption, due to the importance of horticultural crop production. In order to replace the use of MB, research in Italy was aimed at: a) reducing the use of MB and its emission (short-term goal); b) developing alternative pest control methods, based on available technologies (mid-term goal); c) developing new MB alternatives (mid- and long-term goal). Italian growers switched to other fumigants, applied at reduced dosages, lowering their environmental impact and risk of worker exposure. Moreover, the adoption of non-chemical alternatives slowly but steadily increased as a result of the many activities (demonstration trials, seminars, etc.) carried out in the country. The gradual shift to MB alternatives over a 10 year period, as well as the use of half rates of MB under virtually impermeable plastic films (VIFs), has generally prevented the feared loss of competitiveness of Italian horticulture. Extension in cooperation with the fumigation companies was able to provide growers with a range of methods for soil disinfestation. The experience gained in Italy and how it can help developing countries to define strategies and training programmes needed to comply with the Montreal Protocol is discussed.

Crops, Agricultural↗