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[Role of oxidative processes in the realization of the adaptive mechanisms of the human placenta].

Redox reactions were studied in 217 placentas obtained after partus maturus and pathological labor (premature labor, gestoses, incompatibility by Rh antigen, uterine inertia, placentas at early therapeutic and spontaneous abortions). Several uniform alterations were observed in activities of NADP-dependent isocitrate dehydrogenase, lactate-, glutamate- and malate dehydrogenases. Increase in the activity of these enzymes was accompanied by alteration in distribution of LDH isoenzymes and by elevated formation of glutamic acid; activities of transaminases, cytochrome c and cytochrome oxidase were unaltered. The alterations observed appear to be due to activation of compensatory-adaptive mechanisms of placenta.

Abortion, Spontaneous

Matching genomic evidence to claims about Mycobacterium avium subsp. paratuberculosis: Host association, host adaptation, mechanism, and virulence.

Whole-genome sequencing (WGS) permits high-resolution comparison of Mycobacterium avium subsp. paratuberculosis (MAP) isolates and pangenome analysis. Combined with animal-movement data, WGS can support transmission inference, but resolution alone does not establish the biological meaning of genomic variation. This focused narrative review applies a two-dimensional framework to purposively selected MAP studies, separating claim targets from support profiles. Claim targets include lineage identity, host-source or lineage characterization, host association, transmission, candidate genomic features, measured bacterial or host-cell phenotypes, natural-host infection fitness, disease or damage, shedding, and control outcomes. Depending on the claim, evidence operations may include characterization, context-aware comparative inference, direct endpoint ascertainment, and controlled feature perturbation; these are non-ordinal and may co-occur. On-target attribution, independent replication, and transportability are reported separately. The claim, not the study, is the unit of assessment. Typing markers support isolate or lineage discrimination, whereas phylogenomics supports evolutionary inference; neither alone establishes host adaptation. Pangenome comparisons and microbial genome-wide association studies nominate candidate features rather than establish adaptation. Cell-envelope and iron-associated studies support specified biochemical, transcriptional, or physiological phenotypes under defined conditions, while macrophage and calf models support only the endpoints measured. Annotated sequence variation alone nominates pathogenicity hypotheses. Across the illustrative studies selected here, MAP genomics most directly supported lineage classification, candidate discovery, measured bacterial phenotypes, bounded transmission inference, and natural-host infection-fitness claims. Claims about adaptation, mechanism, virulence, or control require endpoints and comparisons matched to the stated claim and model; feature-specific causal claims additionally require evidence linking the bacterial feature to the measured endpoint.

Claim boundaries

Genomic insights into karyotype evolution and adaptive mechanisms in Polygonaceae species.

Polygonaceae, with ecological versatility and global distribution, is an ideal system for investigating plant adaptation. However, the genomic mechanisms underlying its karyotype evolution and environmental resilience remain unclear. We herein present chromosome-level genomes of 11 species from 10 Polygonaceae genera. Our analyses reveal that Gypsy retrotransposons are key drivers of genome size variations in Polygonaceae. We reconstructed a Polygonaceae ancestral karyotype comprising 28 proto-chromosomes and elucidated evolutionary trajectories via extensive chromosomal rearrangements. Furthermore, we constructed a cross-genus super pan-genome for Polygonaceae, identifying 80,055 gene families, of which 9,845 (12.30%) are core gene families. Private genes are found to contribute significantly to interspecific differences in adaptability. Notably, gene copy number variations are identified as a critical factor influencing adaptations to diverse niches involving species-specific increases in metabolic pathways. This study provides a genomic framework for Polygonaceae karyotype plasticity and adaptive innovation, offering insights into plant evolution under environmental challenges.

Karyotype

A deep metagenomic atlas of Qinghai-Xizang Plateau lakes reveals their microbial diversity and salinity adaptation mechanisms.

The Qinghai-Xizang Plateau (QXP), harboring the planet's highest density of plateau lakes, offers an exceptional biogeographic environment for studying extremophilic microbial communities and their adaptation to salinity. Through deep metagenomic sequencing, we construct the Qinghai-Xizang Lake Sediment Genome (QXLSG) catalog, a high-resolution genomic catalog comprising 5,866 metagenome-assembled genomes (MAGs), 58.16 million non-redundant protein encoding genes, and 19,008 biosynthetic gene clusters. Notably, 80.78% of the 2,742 species-level MAGs represent undescribed taxa, significantly expanding the known microbial diversity. Salinity emerges as the primary environmental factor influencing microbial community. Functional annotation highlights that the "salt-out" strategy, particularly the uptake of glycine betaine, is the main mechanism for salinity tolerance. This strategy is prevalent in both hypersaline lake communities and the dominant microbial phyla. Overall, this study provides a crucial genetic resource for future bioprospecting and deepens our understanding of the fundamental mechanisms of microbial adaptation to extreme saline environments.

Lakes

Loss of adaptive mechanisms during aging.

Factors contributing to modifications in the capability for enzyme adaptation as an expression of aging are reviewed. Specific examples of altered enzyme adaptations during aging include the responses of hepatic glucokinase activity to glucose and hepatic tyrosine aminotransferase activity to starvation in Sprague-Dawley rats. These impaired enzyme adaptations apparently are not the consequence of alterations in hepatic function during aging. Instead, they reflect disturbances in extrahepatic hormonal regulatory mechanisms. Specific examples include modifications in the control of circulating levels of insulin glucagon, corticosteroids, and thyroid hormones. Age-dependent changes in the regulation of circulating levels of insulin probably originate within the impaired ability of pancreatic islets of Langerhans to secrete the hormone in response to glucose. The rationale for exploiting this experimental approach as a means to understand biological aging is discussed.

Adaptation, Physiological

Properties of length-selective and non-length-selective adaptation mechanisms in human vision.

The contrast threshold elevation effect has been measured for one dimensional (grating) and for two dimensional (spot) stimulus patterns. It has been shown previously (Burton and Ruddock, 1978) that such stimuli elicit, respectively, non-length-selective and length-selective adaptation effects. It is established that, unlike the frequency shift effect, the contrast threshold elevation effect is sensitive to the width of the light but not to that of the dark elements of the stimulus patterns. Adaptation to spot patterns elicits a significant threshold elevation for detection of both spot and grating test stimuli, but only under monoptic viewing conditions. The experimental findings are summarized in a block-diagram and it is shown that adaptation to grating patterns is successfully described by the spatial frequency response data given by Maudarbocus and Ruddock (1973).

Adaptation, Physiological

[Regulatory properties of the intestinal enzymes of higher and lower animals as an adaptation mechanism in digestion and absorption].

It is shown that certain key enzymes in membranous digestion (alkaline phosphatase, peptidase, gamma-amylase) are allosteric and ensure the autoregulation and the homoeostasis of the final stages of hydrolysis and of the initial stages of nutrient transport. This mechanism was evidenced not only in vertebrates (mammals, birds, fishes), but also in invertebrates (drosophilae). The comparison of the triton and trypsin forms of the enzymes permitted to locate centres of regulation in the hydrophobic parts of amphipathetic enzymes (as illustrated by the examples of alkaline phosphatase and gamma-amylase of of the rat and of the drosophila). A considerable variability of the regulatory characteristics of the enzymes under investigation was demonstrated in the different varieties of drosophila. The authors present a hypothesis on the role of the regulatory properties of digestive enzymes in the physiology and the pathology of the digestive and transport systems of the small intestine.

Adaptation, Physiological

Satellite DNAs in eukaryotes: a non-adaptive mechanism of speciation which originated with sexual reproduction?

Satellite DNAs may have originated during evolution at the same time as sexual reproduction in order to suppress crossingover between the 2 heterogametic sex chromosomes, and may have acquired a function of sterility barriers in hybrid species during evolution. This origin of satellite DNAs appears to be reflected in different stages of speciation: partial and total heterogametic sex hybrid sterility and full hybrid sterility might correspond to subspecies, semispecies and full species.

Animals

Ventilatory capacity among highland Bods: a possible adaptive mechanism at high altitude.

Ventilatory capacity (forced vital capacity, forced expiratory volume and maximal voluntary ventilation) among Highland Bods (3514 m altitude) was higher than in an ethnically similar population residing at a lower altitude in Kulu Valley (1500--2200 m). Increased ventilatory capacity appears to have developed among native highlanders as a consequence of a biological response to high altitude. Numerous factors such as low oxygen pressure, increased work-load and minimal air pollution may explain these findings.

Adolescent

The role of increased Ca++ influx as a possible additional adaptive mechanism in experimental left ventricular hypertrophy (exp LVH).

Membrane potentials, isometric contraction and autohistoradiography with 45Ca in papillary muscle of rats with experimental LVH without cardiac failure as compared with sham-operated animals proved an increased Ca influx per beat and a Ca accumulation at or near the sarcolemma. This phenomenon is regarded as an additional mechanism for the improvement of the cardiac performance in the compensatory stage of the experimental LVH without cardiac failure.

Action Potentials

Laboratory Evolution Reveals Transcriptional Mechanisms Underlying Thermal Adaptation of Escherichia coli.

Adaptive laboratory evolution is able to generate microbial strains, which exhibit extreme phenotypes, revealing fundamental biological adaptation mechanisms. Here, we use adaptive laboratory evolution to evolve Escherichia coli strains that grow at temperatures as high as 45.3 °C, a temperature lethal to wild-type cells. The strains adopted a hypermutator phenotype and employed multiple systems-level adaptations that made global analysis of the DNA mutations difficult. Given the challenge at the genomic level, we were motivated to uncover high-temperature tolerance adaptation mechanisms at the transcriptomic level. We employed independently modulated gene set (iModulon) analysis to reveal five transcriptional mechanisms underlying growth at high temperatures. These mechanisms were connected to acquired mutations, changes in transcriptome composition, sensory inputs, phenotypes, and protein structures. They are as follows: (i) downregulation of general stress responses while upregulating the specific heat stress responses, (ii) upregulation of flagellar basal bodies without upregulating motility and upregulation fimbriae, (iii) shift toward anaerobic metabolism, (iv) shift in regulation of iron uptake away from siderophore production, and (v) upregulation of yjfIJKL, a novel heat tolerance operon whose structures we predicted with AlphaFold. iModulons associated with these five mechanisms explain nearly half of all variance in the gene expression in the adapted strains. These thermotolerance strategies reveal that optimal coordination of known stress responses and metabolism can be achieved with a small number of regulatory mutations and may suggest a new role for large protein export systems. Adaptive laboratory evolution with transcriptomic characterization is a productive approach for elucidating and interpreting adaptation to otherwise lethal stresses.

Escherichia coli

Retinal mechanisms of visual adaptation and afterimages.

Recent results obtained from recordings of isolated photoreceptor activity and from correlations of this activity with time-dependent changes in the responses of other retinal cells in several vertebrates have made a thorough revision of former theories of visual adaptation necessary. The present paper reviews the current state of research and relates the new discoveries with psychophysical findings in an attempt to explain human light and dark adaptation from the novel starting point. The former conceptions of adaptation have to be replaced with a three-level process consisting of photochemical receptor neural and network adaptation. Several adaptive mechanisms can be discerned at each level. Depending on adaptation conditions, any level of the three can play a dominating role and can also produce afterimages that display the behaviour of the mechanisms working at each level. The total achievement of visual adaptation is an optimized end product of the actions of all the various mechanisms.

Adaptation, Ocular

[Mechanisms of adaptive regulation of complex motor systems (regulation with respect to position and acceleration)].

Possible mechanisms of adaptive control over human and animal motor systems are described for the case when the information about position or movement acceleration of its parts is used. A model of the control system with the standard which functions in two modes of operations is treated. The first mode is distinguished by measured control signal leaps used for the identification of a system state and for a further movement correction and precise definition of active muscle composition. The second mode is characterized by the estimation of movement direction only, in case when a certain value of a regulated parameter is maintained or reached. Some problems of the control over a multilinked system are also discussed.

Acceleration

[Compositional integration of nervous processes in mechanisms of adaptive autoregulation of functions and detection of ecologically significant stimuli].

The latest data on regulatory mechanisms based on synchronization principle elucidate the selective responses of cellular systems to ecologically adequate stimuli, and the mechanisms of formation of the stable neurodynamic changes in separate cerebral structures. The elementary mechanism consists in facilitation of excitatory and inhibitory processes, which respectively increases or suppresses the current level of the brain functional activity. A more complex mechanism of the adaptive plasticity relies on associations involving motivational structures into the biorhythm control. The functional interaction among the cortex and subcortical structures increases at that, the cyclic pattern and the spatial-temporal composition of intracentral interrelationships alters, as well as the correlation between the central and the peripheral functions.

Adaptation, Physiological

Adaptive coping mechanisms in adult acute leukemia patients in remission.

The adult leukemia patient in a drug-induced remission possesses a unique set of emotional responses as he adjusts to an altered life-style and a life-threatening disease. Six patients, ranging in age from 24 to 62 years and being treated with monthly maintenance chemotherapy, were interviewed over a six-month period. The adaptive coping mechanisms most frequently identified were denial of being sick, identification with fellow patients to form a "hospital family," and anticipatory grief of one's own losses by participation in grieving another patient's death. The means of adjustment was to adapt to the "hospital family" and benefit from the therapeutic milieu established on the ward. The patient's total response to remission in acute leukemia can be influenced positively by appropriate intervention based on an assessment of his previous and present patterns of coping.

Acute Disease