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Biomedical subjects

G M Mrevlishvili

Publications and source records attributed to G M Mrevlishvili.

At least 19 recordsLinked to original sources

Pycnometric, viscometric and calorimetric studies of the process to release the double-stranded DNA from the Un bacteriophage.

Knowledge of both the packaging of the linear, double-stranded (ds)DNA in bacteriophages and its subsequent release into the bacterial host is vital to our understanding of phage infection. There is now strong evidence that packaging requires a powerful rotary motor fuelled by ATP. From thermodynamic studies, however, it has been proposed that, at least for those viruses with a contractile tail, the dsDNA ejection from the phage head is a relatively simple physical process that does not require cellular energy and is facilitated by the difference in the conditions of the medium in the environments inside and outside the head. In this case, there should be no enthalpic effects associated with the dehiscence of the capsid and no destruction of it or the other structural elements of the phage. For the present study of temperature-induced phage dehiscence, we used a newly discovered phage with a contractile tail, named the Un (unknown) bacteriophage. Evidence is given of its characteristics in terms of ultrastructural morphology, serological parameters, host range and interaction with host cell. These show that, although it has similarities with the T-even phages and, in particular, the DDVI phage, it appears to be a new type. Earlier viscometric studies with it had shown that the temperature-induced release of the capsid dsDNA was completed at 70 degrees C. In the present investigation, a concentrated suspension of purified phage was subjected to pycnometric analysis through the temperature range of 30 to 70 degrees C. This showed that a significant and abrupt increase in the phage partial volume takes place, which remarkably is in the order of threefold. Viscometric measurements over time at 72 degrees C gave a kinetic curve from which evidence it was suggested that the temperature-induced DNA release is similar to a second order phase transition. At the same time, data from differential scanning calorimetry over the same temperature range showed no enthalpic effect. Our results indicate that the ejection of DNA from the capsid tail is driven by an entropy change.

Bacteriophages↗

Liposome-DNA interaction: microcalorimetric study.

The authors applied differential scanning calorimetry (DSC) for studying the thermodynamic characteristics of DNA-liposome interactions. At the first stage, the melting curves of the 'order-disorder' thermal transition for lipid component and of the 'helix-coil' transition for DNA were obtained. At the second stage, the phase behavior of the DNA-lipid mixture as a function of both components (lipid/DNA ratio) was obtained. The liposome-DNA interaction was investigated comparing the melting curves of the pure components and the mixture.

Calorimetry, Differential Scanning↗

[A viscosimetric study of thermally induced release of ds-DNA from Un phage].

The thermally induced ejection of DNA from the head of the Un phage was studied by viscosimetry, pH was used as a variable external factor. The results obtained suggest that the infection of the bacterium by the phage occurs in the pH range 6-10 rather than in the acidic medium (pH 4-5) because the infection can take place only if the DNA is completely ejected from the phage head. It was shown that the ejection of DNA upon dilution of the initial concentration of the phage depends on the time required for the equilibrium of the phage suspension in the corresponding buffer solution to be established after which the measurements can be performed. In our experiments, this time interval was 24 h.

Bacteriophages↗

[Heat capacity of DNA in native and denatured states].

Heat capacity of DNA in native and denatured states was estimated by the method of microcalorimetry. This value was shown to depend on the transition temperature and is determined by an increase of the number of oscillative freedom degrees of the polynucleotide chains in the state of statistical coils, and by hydrophobic effects and by "the melting of water ridge" located in native DNA in the B-form.

Calorimetry↗

[Microcalorimetric and electron spin resonance study of the influence of UV radiation on collagen].

It has been shown by microcalorimetry that UV-irradiation cardinally alters the temperature dependence of heat capacity of a collagen solution and decreases the enthalpy of collagen heat denaturation. By using the method of electron spin resonance (ESR), it was found that the primary products of UV-irradiated acid-soluble collagen are the atomic hydrogen and the anion radical of acetic acid. The latter, under the influence of long-wavelength UV light, is transformed into the methyl radical, which interacts with acetic acid to produce acetic acid radical. The above free radicals interact with the collagen molecule, as a result of which seven superfine components with the split of deltaH = 1.13 mT are obtained in the ESR spectrum. It is assumed that this spectrum is related to the free radical that occurred in the proline residue of the collagen molecule. In this particular case, this is a major structural defect in the triple helix of collagen, which results in instability of the macromolecule.

Animals↗

[A theoretical model of DNA packaging in the phage head].

Statistical model of dsDNA packaging to icosahedral bacteriophage capsid is presented. The model describes intraphage DNA as a globule, i.e. intramolecular liquid crystal. We analyse the free energy of DNA, which has a globulized part inside the phage capsid and coil-like tail outside it. Conditions when processes of DNA movement into capsid or back are thermodynamically favorable are investigated. These processes are not accompanied with any thermal effects. It is not "all or none" type process, i.e. intermediate stable states are possible. The role of DNA interaction with the capsid inner wall is considered. The essential model abilities for qualitative explanation of experimental data are exhibited.

Bacteriophages↗

[Calorimetric study of aqueous solutions of histone H1 and poly-L-proline II at low temperatures].

Low temperature differential scanning microcalorimetric investigation of water-histone H1 and water-poly-L-proline investigation was carried out. The concentrational dependence of the thermodynamic parameters (delta H(C), Tmax(C), delta S(T, C] for "bulk" water layers were studied. It was shown that the influence of these macromolecules on the structure and properties of surrounding water layers at the same degree of hydration is different.

Animals↗

[Energy of cooperative transitions in bacteriophage SD].

Heat denaturation of native phages SD suspensions, phage "shadows", and isolated phage DNA solutions were studied by scanning microcalorimetry and viscosimetry. Energetic parameters of cooperative transitions of protein fraction and DNA were measured. DNA melting was shown to be preceded by the destruction of capsid and protein denaturation. The melting curve of isolated DNA and DNA in the presence of protein component is characterized by a fine structure which is completely restored at repeated denaturation only in the presence of the protein component. "Creeping" of DNA out of the capsid in heated suspensions at 50-52 degrees C was shown to proceed with "zero" enthalpy without significant endo- and exo-thermal effects. No change of specific heat capacity of the suspension was also observed. It is emphasized that the mechanism of DNA going out of the capsid can be understood by studying DNA hydration inside the phage and its change in the course of liberation of the phage genome from the protein capsid.

Calorimetry↗

[Study of dynamic properties of water in poly(A) and poly(U) solutions by proton magnetic resonance].

Proton magnetic relaxation in aqueous solutions of polyadenylic and polyuridylic acids in the temperature range (10-80 degrees C) and acidities (pH 3-9.7) has been investigated. Activation energies of water molecule diffusion and proton exchange, as well as the velocities of these processes have been determined. It is established that from the point of view of magnetic relaxation, the state of single helices resulted from the thermal conformation transition, are not equal to the state obtained by the change of the pH of solution; it refers both to the secondary structure of the chains and the dynamical behaviour of the biopolymer hydrate layers.

Chemical Phenomena↗

[Low-temperature heat capacity of DNA in various conformation states].

Experimental results are presented on temperature--dependent DNA heat capacity in three different states: a) intact--native DNA in the conformation of double helix, b) disordered conformation of polynucleotide chains in the state of statistical coils, c) completely "degenerated" polynucleotide chains--mechanical mixture of nucleotides. Data on heat capacity (4-400 K) at different water content in the specimens allow a definition of relative changes in the pattern of the entropy temperature dependence for these conformational states with the account for the structural effect of water.

Calorimetry↗