PubMed Health⌕ Search

Biomedical subjects

Hitoshi Miyasaka

Publications and source records attributed to Hitoshi Miyasaka.

At least 19 recordsLinked to original sources

Giant macrocycles composed of thiophene, acetylene, and ethylene building blocks.

Fully conjugated giant macrocyclic oligothiophenes with 60pi, 90pi,120pi, 150pi, and 180pi frames (1, 2, 3, 4 and 5) have been designed, and their butyl-substituted derivatives (1a, 2a, 3a, 4a, and 5a) have been synthesized using modified Sonogashira and McMurry coupling reactions as key steps. The 60-180pi systems 1-5 are circular with 1.8-6 nm inner cavities and 3.3-7.5 nm outside molecular diameters. Compound 1a containing ten 3,4-dibutyl-2,5-thienylene, eight ethynylene, and two vinylene units has been converted into macrocyclic oligo(3,4-dibutyl-2,5-thienylene-ethynylene) 6a using bromination/dehydrobromination procedure. Giant macrocycles 1a-6a exhibit a red shift of their absorption spectra and a fairly strong fluorescence with a large Stokes shift as compared to a linear conjugated counterpart having five thiophene rings. Compounds 1a-6a exhibit multistep reversible redox behaviors with fairly low first oxidation potentials, reflecting their cyclic conjugation. Furthermore, chemical oxidation of 1a-6a with FeCl3 shows drastic changes of spectroscopic properties due to intramolecular and intermolecular pi-pi interactions. Doping of 1a-3a with iodine forms semiconductor due to its pi-donor properties and pi-pi stacking ability. X-ray analysis of 1a confirmed a round, planar structure with nanoscale inner cavity, and revealed host ability for alkanes and unique packing structure. Interestingly, 2a and 3a self-aggregate in the solid state to form "molecular wires," which are about 200 nm thick and more than 1 mm long. The internal structures of fibrous aggregates have been investigated by optical microscope, scanning electron microscopy, atomic force microscopy, and X-ray diffraction analyses.

Acetylene↗

A look at molecular nanosized magnets from the aspect of inter-molecular interactions.

Nanosized molecular magnetic materials such as single-molecule magnets and single-chain magnets are recent attractive research targets in the fields of materials chemistry and physics, not only because of their fundamental fascination, but also because of their potential applications as ultimate memory devices or in quantum computations. In this paper, we give our personal perspectives on these materials. In particular "magnetic assemblies of single-molecule magnets", in which inter-molecular interaction is an essential factor in determining their properties, will be focused on together with related compounds reported recently.

Journal Article↗

Single-chain magnet behavior in an alternated one-dimensional assembly of a Mn(III) Schiff-base complex and a TCNQ radical.

An alternated 1:1 chain compound of a Mn(III) salen derivative and the TCNQ monoradical was synthesized: [Mn(5-TMAMsaltmen)(TCNQ)](ClO(4))(2) (1) (TCNQ=tetracyano-p-quinodimethane; 5-TMAMsaltmen=N,N'-(1,1,2,2-tetramethylethylene) bis(5-trimethylammoniomethylsalicylideneiminato)). Compound 1 has a zigzag chain structure packed with adjacent chains with an interchain MnMn distance of over 8 Angatrom. As compound 1 contains no crystallization solvent, the void spaces between chains are occupied only by ClO(4) (-) counter ions. Compound 1 has a structure reminiscent of what has been observed in the family of Mn(III)(porphyrin)-TCNE or -TCNQ compounds reported previously by Miller and co-workers and we demonstrate herein its unique single-chain magnet behavior among this family of compounds. The direct current (dc) magnetic measurements established the one-dimensional nature of compound 1 with an antiferromagnetic exchange coupling, J/k(B) approximately -96 K, between the Mn(III) ion and TCNQ radical and with an activated correlation length (Delta(xi)=26.5 K) at low temperatures (50-15 K). The slow relaxation of the magnetization was shown in compound 1 by the field hysteresis of the magnetization observed below 3.5 K (with a coercive field up to 14 kOe at 1.8 K). Single-crystal magnetization measurements demonstrated the uniaxial symmetry of this compound and allowed an estimation of the anisotropy field, H(a) approximately 97 kOe. The absence of magnetic ordered phase or spin-glass behavior was established by heat-capacity calorimetry measurements that exhibit no abnormality of C(p) between 0.5 K and 10 K. The study of the magnetization relaxation by combined ac (alternating current) and dc techniques showed that compound 1 possesses a single relaxation time (tau). As the consequence of the finite size of the chain, the temperature dependence of tau presents two activated regimes above and below 4.5 K with tau(01)=2.1 x 10(-10) s, Delta(tau1)=94.1 K and tau(02)=6.8 x 10(-8) s and Delta(tau2)=67.7 K, respectively. The detailed analysis of these dynamics properties together with the correlation length, allows an unambiguous demonstration of the single-chain magnet behavior in 1.

Journal Article↗

Long-range ordered magnet of a charge-transfer Ru2(4+)/TCNQ two-dimensional network compound.

Two isostructural 2D assemblies composed of [Ru2(O2CCF3)4] and TCNQ or TCNQF4 in a 2:1 ratio were synthesized: [{Ru2(O2CCF3)4}2TCNQ].3(p-xylene) (1b) and [{Ru2(O2CCF3)4}2TCNQF4].3(p-xylene) (2). In 1b, the TCNQ moiety is assigned to be neutral because of no significant electron transfer from the Ru24+ units. Therefore, the magnetic property of 1b can be understood to be a paramagnetic nature of the isolated Ru24+ unit, while, a fully charge-transfer from the Ru2 units to the TCNQF4 molecules in 2 leads to charge delocalization spreading over the 2D network and allows a long-range magnetic order to occur. On the basis of an idea of the resonance scheme in charge-transfer D2A network systems, the first successful example of a charge-transferred magnet in the Ru2-TCNQ system was rationally designed by tuning redox between [Ru2]4+ and the TCNQ molecule changing from TCNQ to TCNQF4.

Journal Article↗

Simultaneous control of turbidity and dilution rate through adjustment of medium composition in semi-continuous Chlamydomonas cultures.

For production of starch in algal cultures, a growth rate limited by a nutrient is an important factor. Under phototrophic conditions, turbidity must be also paid attention, as the shading effect may affect its productivity. Semi-continuous cultivation methods, which enable control of turbidity and dilution rate (D) at the same time, have been developed for evaluation of those factors on starch production in Chlamydomonas sp. A specific feature of the methods is in a process of alternately feeding medium adjusted at two different nitrogen (N) concentrations. In the turbidostat-based method, a turbidostat culture was operated repeating three steps of determining D within a preset interval, alternating media by comparing the D with a preset value, and adjusting D in the next interval by feeding the selected medium. In the chemostat-based method, turbidity of a chemostat culture was controlled by repeating two steps of alternating media by comparing transmitted photon flux intensity (I) with a preset value and adjusting I by feeding the selected medium. D controlled by the turbidostat-based method reached quickly a preset value as low as 0.010/h, and then it was dispersed around but above the preset value. On the other hand, mean N concentrations of fed media formed a plateau. In the chemostat-based method, I was well controlled to a preset value while the mean N concentrations were a bit fluctuated. Starch concentration varied from 0.052 to 0.41 g/L with turbidity and D defined by these methods.

Animals↗

Whole-cell arsenite biosensor using photosynthetic bacterium Rhodovulum sulfidophilum. Rhodovulum sulfidophilum as an arsenite biosensor.

An arsenite biosensor plasmid was constructed in Escherichia coli by inserting the operator/promoter region of the ars operon and the arsR gene from E. coli and the crtA gene, which is responsible for carotenoid synthesis in the photosynthetic bacterium, Rhodovulum sulfidophilum, into the broad-host-range plasmid vector, pRK415. The biosensor plasmid, pSENSE-As, was introduced into a crtA-deleted mutant strain of R. sulfidophilum (CDM2), which is yellow in culture due to its content of spheroiden (SE) and demethylspheroidene (DMSE). CDM2 containing pSENSE-As changed from yellow to red by the addition of arsenite, which caused enzymatic transformation of SE and DMSE to spheroidenone (SO) and demethylspheroidenone (DMSO). Reverse transcriptase PCR analysis showed that the color change depended on transcription of the crtA gene in pSENSE-As. The color change could be clearly recognized with the naked eye at 5 microg/l arsenite. The biosensor strain did not respond to other metals except for bismuth and antimony, which caused significant accumulation of SO and DMSO in the cells at 60 and 600 microg/l, respectively. This biosensor indicates the presence of arsenite with a bacterial color change without the need to add a special reagent or substrate for color development, enabling this pollutant to be monitored in samples by the naked eye in sunlight, even where electricity is not available.

Antimony↗

From an S(T) = 3 single-molecule magnet to diamagnetic ground state depending on the molecular packing of Mn(III)salen-type dimers decorated by N,N'-dicyano-1,4-naphthoquinonediiminate radicals.

Two manganese(III) tetradentate Schiff-base dimers to which N,N'-dicyano-1,4-naphthoquinonediiminate (DCNNQI) radicals are attached have been selectively synthesized by varying the solvents used in the reactions: [Mn2(5-MeOsaltmen)2(DCNNQI)2].MeOH (1) and [Mn2(5-MeOsaltmen)(2)(DCNNQI)(2)] x 2CH2Cl2.2CH3CN (2) [5-MeOsaltmen2- = N,N'-(1,1,2,2-tetramethylethylene)bis(5-methoxysalicylideneiminate)]. These two complexes share the same molecular core, [(DCNNQI.-)-Mn(III)-(O)2-Mn(III)-(DCNNQI.-)], where -(O)2- is a biphenolate bridge in the out-of-plane dimerized [Mn(2)(5-MeOsaltmen)2]2+ moiety. However, their packing arrangements are completely different. Whereas complex 1 is found to be relatively isolated, strong intermolecular dimerization of the DCNNQI moieties (with the nearest contact being approximately 3.0 A) is observed in 2, forming a one-dimensional chain of [-Mn(III)-(O)2-Mn(III)-(DCNNQI.-)2-](infinity). The magnetic susceptibility of 1 can be modeled with an [S = 1/2, 2, 2, 1/2] four-spin system including strong antiferromagnetic Mn(III)/DCNNQI radical coupling (J(Mn/rad)/kB = -23 K) and ferromagnetic Mn(III)/Mn(III) coupling through the biphenolate bridge (J(Mn/Mn)/kB = +2.0 K). These interactions lead to an ST = 3 ground state that possesses significant uniaxial anisotropy (D(S=3)/kB = -2.1 K). Low-temperature ac and dc magnetic data of 1 reveal its single-molecule magnet behavior with quantum tunneling of the magnetization. By contrast, 2 possesses the diamagnetic ground state induced by dominating Mn(III)-Mn(III) antiferromagnetic interactions mediated by the diamagnetic DCNNQI dimers and/or pi-pi contact along the b axis.

Journal Article↗

Dynamical valence fluctuation at the charge-density-wave phase boundary in iodide-bridged Pt compound [Pt(chxn)2I]I2.

We synthesized a novel iodo-bridged linear chain platinum compound, having the quasi-two-dimensional charge-density-wave (CDW) ground state and the smallest band gap. In this compound, we discovered an anomalous valence state in the boundary region at which the CDW phase alternates in the crystal by means of ESR, X-ray diffuse scattering, STM, and electrical resistivity. This anomalous state can be explained by the fast fluctuation between Pt(IV)-I...Pt(II) and Pt(II)...I-Pt(IV) in the double well potential. This is the first observation of the dynamical fluctuation of the CDW phase among the quasi one-dimensional halogen-bridged complexes.

Journal Article↗

Two-dimensional networks based on Mn4 complex linked by dicyanamide anion: from single-molecule magnet to classical magnet behavior.

Three two-dimensional (2D) network compounds based on Mn(III)/Mn(II) tetranuclear single-molecule magnets (SMMs) connected by dicyanamide (dcn-) linkers have been synthesized: [Mn4(hmp)4(Hpdm)2(dcn)2](ClO4)2 x 2 H2O x 2 MeCN (2), [Mn4(hmp)4Br2(OMe)2(dcn)2] x 0.5 H2O x 2 THF (3), [Mn4(hmp)6(dcn)2](ClO4)2 (4), where Hhmp and H2pdm are 2-hydroxymethylpyridine and pyridine-2,6-dimethanol, respectively. The [Mn4]/dcn- system appears very versatile, but enables its chemistry to be rationalized by a fine-tune of the synthetic conditions. The double cuboidal [Mn4] unit is preserved in the whole family of compounds, despite strong modifications of its Mn(II) coordination sphere. The chemical control of the coordination number of dcn- on the Mn(II) sites has been the key to obtain the following series of compounds: a discrete cluster, [Mn4(hmp)6(NO3)2(dcn)2] x 2 MeCN (1), 2D networks (2, 3, and 4), and the previously reported 3D compound, [Mn4(hmp)4(mu3-OH)2][Mn(II)(dcn)6] x 2 MeCN x THF. Direct current magnetic measurements show that both Mn2+-Mn3+ and Mn3+-Mn3+ intra-[Mn4] magnetic interactions are ferromagnetic leading to an S(T) = 9 ground state for the [Mn4] unit. Despite the very similar 2D lattices in 2-4, the two kinds of orientation of the [Mn4] unit (i.e., angle variations between the two easy axes) lead to different magnetic properties ranging from SMM behavior for 2 and 1 to a long-range canted antiferromagnetic order for 4. Compound 3 is more complicated as the magnetic measurements strongly suggest the presence of a canted antiferromagnetic order below 2.1 K, although the magnetization slow relaxation is simultaneously observed. Heat capacity measurements confirm the long-range magnetic order in 4, while in 3, the critical behavior is frozen by the slow relaxation of the anisotropic [Mn4] units.

Journal Article↗

Slow relaxation in a one-dimensional rational assembly of antiferromagnetically coupled [Mn4] single-molecule magnets.

Four discrete Mn(III)/Mn(II) tetranuclear complexes with a double-cuboidal core, [Mn(4)(hmp)(6)(CH(3)CN)(2)(H(2)O)(4)](ClO(4))(4).2CH(3)CN (1), [Mn(4)(hmp)(6)(H(2)O)(4)](ClO(4))(4).2H(2)O (2), [Mn(4)(hmp)(6)(H(2)O)(2)(NO(3))(2)](ClO(4))(2).4H(2)O (3), and [Mn(4)(hmp)(6)(Hhmp)(2)](ClO(4))(4).2CH(3)CN (4), were synthesized by reaction of Hhmp (2-hydroxymethylpyridine) with Mn(ClO(4))(2).6H(2)O in the presence of tetraethylammonium hydroxide and subsequent addition of NaNO(3) (3) or an excess of Hhmp (4). Direct current (dc) magnetic measurements show that both Mn(2+)-Mn(3+) and Mn(3+)-Mn(3+) magnetic interactions are ferromagnetic in 1-3 leading to an S(T) = 9 ground state for the Mn(4) unit. Furthermore, these complexes are single-molecule magnets (SMMs) clearly showing both thermally activated and ground-state tunneling regimes. Slight changes in the [Mn(4)] core geometry result in an S(T) = 1 ground state in 4. A one-dimensional assembly of [Mn(4)] units, catena-{[Mn(4)(hmp)(6)(N(3))(2)](ClO(4))(2)} (5), was obtained in the same synthetic conditions with the subsequent addition of NaN(3). Double chairlike N(3)(-) bridges connect identical [Mn(4)] units into a chain arrangement. This material behaves as an Ising assembly of S(T) = 9 tetramers weakly antiferromagnetically coupled. Slow relaxation of the magnetization is observed at low temperature for the first time in an antiferromagnetic chain, following an activated behavior with Delta(tau)/k(B) = 47 K and tau(0) = 7 x 10(-)(11) s. The observation of this original thermally activated relaxation process is induced by finite-size effects and in particular by the noncompensation of spins in segments of odd-number units. Generalizing the known theories on the dynamic properties of polydisperse finite segments of antiferromagnetically coupled Ising spins, the theoretical expressions of the characteristic energy gaps Delta(xi) and Delta(tau) were estimated and successfully compared to the experimental values.

Journal Article↗

Direct observation of the disorder of the methyl group of (R)-1,2-diaminopropane ligand in the quasi-1D bromo-bridged Ni(III) complex by STM.

Scanning tunneling microscopy (STM) has been measured in quasi-one-dimensional (Quasi-ID) bromo-bridged Ni(III) complexes. In the STM image of [Ni(pn)2Br]Br2 (pn = (R)-1,2-diaminopropane), the bright spots are fluctuated zigzags. Such a result indicates that the methyl groups of the pn ligands are not arranged on the right- and left-hand alternatively along the chains, but in the domain structures or fluctuated structures. This is the first direct observation of the disorder of the methyl group of pn ligands in real space.

Journal Article↗

Colorimetric dimethyl sulfide sensor using Rhodovulum sulfidophilum cells based on intrinsic pigment conversion by CrtA.

A colorimetric whole-cell sensor for dimethyl sulfide (DMS) was constructed based on the in vivo conversion of intrinsic pigments in response to the analyte. In a marine bacterium, Rhodovulum sulfidophilum, carotenoids are synthesized via the spheroidene pathway. In this pathway, demethylspheroidene, a yellow carotenoid, is converted to spheroidene under catalysis of O-methyltransferase. Spheroidene monooxygenase (CrtA) catalyzes the terminal step of the pathway and converts spheroidene to spheroidenone, a red carotenoid. Here, the CrtA gene in R. sulfidophilum was removed and then reintroduced downstream of the DMS dehydrogenase gene promoter. Using this whole-cell sensor, 3 muM DMS or dimethyl sulfoxide can be detected without adding any color-forming reagent. The ratio of the red spheroidenone to total carotenoids increased, as the DMS concentration was raised to 0.3 mM. Comparison of the signal to the background color indicated a shift in the color coordinate from a yellow to a red hue. An intense signal was obtained with 1-day incubation at a high cell density when sensor cells at the exponential growth phase were used. These results show that the genetically engineered R. sulfidophilum cells can be used to monitor the quality of marine aquacultural environments by the naked eye.

Biosensing Techniques↗

Cyano-bridged Mn(III)3M(III) (M(III) = Fe, Cr) complexes: synthesis, structure, and magnetic properties.

Two cyano-bridged tetranuclear complexes composed of Mn(III) salen (salen = N,N'-ethylene bis(salicylideneiminate)) and hexacyanometalate(III) (M = Fe, Cr) in a stoichiometry of 3:1 have been selectively synthesized using {NH2(n-C12H25)2}3[M(III)(CN)6] (M(III) = Fe, Cr) starting materials: [{Mn(salen)(EtOH)}3{M(CN)6}] (M = Fe, 1; Cr, 2). Compounds 1 and 2 are isostructural with a T-shaped structure, in which [M(CN)6]3- assumes a meridional-tridentate building block to bind three [Mn(salen)(EtOH)]+ units. The strong frequency dependence and observation of hysteresis on the field dependence of the magnetization indicate that 1 is a single-molecule magnet.

Journal Article↗

Quantum tunneling and quantum phase interference in a [Mn(II)2Mn(III)2] single-molecule magnet.

[Mn4(hmp)6(H2O)2(NO3)2](NO3)2.2.5H2O (1) has been synthesized from the reaction of 2-hydroxymethylpyridine (Hhmp) with Mn(NO3)2.4H2O in the presence of tetraethylammonium hydroxide. 1 crystallizes in the triclinic P space group with two crystallographically independent centrosymmetrical [Mn4(hmp)6(H2O)2(NO3)2]2+ complexes in the packing structure. Four Mn ions are arranged in a double-cuboidal fashion where outer Mn2+ are heptacoordinated and inner Mn3+ are hexacoordinated. dc magnetic measurements show that both Mn2+...Mn3+ and Mn3+...Mn3+ interactions are ferromagnetic with J(wb)/k(B) = +0.80(5) K, and J(bb)/k(B) = +7.1(1) K, respectively, leading to an S(T) = 9 ground state. Combined ac and dc measurements reveal the single-molecule magnet (SMM) behavior of 1 with both thermally activated and ground-state tunneling regimes, including quantum phase interference. In the thermally activated regime, the characteristic relaxation time (tau) of the system follows an Arrhenius law with tau0 = 6.7 x 10(-)(9) s and delta(eff)/k(B) = 20.9 K. Below 0.34 K, tau saturates indicating that the quantum tunneling of the magnetization becomes the dominant relaxation process as expected for SMMs. Down to 0.04 K, field dependence of the magnetization measured using the mu-SQUID technique shows the presence of very weak inter-SMM interactions (zJ'/k(B) approximately -1.5 x 10(-3) K) and allows an estimation of D/k(B) at -0.35 K. Quantum phase interference has been used to confirm the D value and to estimate the transverse anisotropic parameter to E/k(B) = +0.083 K and the ground-state tunnel splitting delta(LZ) = 3 x 10(-7) K at H(trans) = 0 Oe. These results rationalize the observed tunneling time (tau(QTM)) and the effective energy barrier (delta(eff)).

Journal Article↗

Unusual accumulation of demethylspheroidene in anaerobic-phototrophic growth of crtA-deleted mutants of Rhodovulum sulfidophilum.

Rhodovulum sulfidophilum produces carotenoids in the spheroidene pathway. Spheroidene monooxygenase, CrtA, catalyzes the conversion of spheroidene to spheroidenone. crtA-deleted mutants of R. sulfidophilum did not produce spheroidenone and demethylspheroidenone. In these mutants, the ratio of demethylspheroidene to spheroidene increased with exposure to light. One mutant exhibiting a spheroidene-predominant phenotype did not grow under anaerobic-light conditions and was devoid of bacteriochlorophyll a, even under semiaerobic-light conditions There was no difference in the growth of the mutants under aerobic-dark conditions. These data suggest that demethylspheroidene is important for photosynthesis in R. sulfidophilum.

Anaerobiosis↗