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Biomedical subjects

J C Gallucci

Publications and source records attributed to J C Gallucci.

At least 19 recordsLinked to original sources

Constraining of small-ring cyclic ether triads by stereodefined spiroannulation to an inositol orthoformate platform. Solution- and gas-phase alkali metal binding affinities for three- to five-membered ring structural combinations.

The structural features most conducive to complexation of the alkali metal ions Li(+), Na(+), and K(+) in a series of constrained inositol orthoformate derivatives have been probed in solution, in the solid state, and in the gas phase by electrospray ionization mass spectrometry. The eight spirotricyclic polyethers differ in the size of the rings containing the potentially ligating oxygen atoms. Although the ring sizes have been limited to three to five atoms inclusively, the combinations of oxirane, oxetane, and tetrahydrofuran are rather extensive and consist of many options. The overall trend for lithium ion affinity is [5.5.5] > [ 5.5.4] > [4.4.4] > [5.5.3] > [5.4.3] > [4.4.3] > [1.1.1] > [3.3.1], an ordering that correlates with the differing polarizabilities of the oxygen atoms, ease of alignment of the nonbonded electron pairs, and the overall size of the ligand as gauged by nonbonded O......O distances.

Journal Article↗

Effect of terminal group sterics and dendron packing on chirality transfer from the central core of a dendrimer.

[structure: see text] The conformational properties of intramolecularly hydrogen-bonded dendrimers constructed from (S)-1,1'-bi-2-naphthol as a chiral central core are described. Circular dichroism studies revealed that chirality transfer to the periphery occurs only when sterically demanding terminal esters are employed and when packing interactions are present.

Journal Article↗

Direct synthesis of previously inaccessible bridgehead azabicyclics by intramolecular cyclization of alpha-sulfonamido and alpha-sulfonimido radicals.

Syntheses of the first bridgehead sultams and the only known bridgehead disulfonimide are described. Both approaches capitalize on the electrophilicity of alpha-sulfonyl radicals and their propensity to undergo intramolecular ring closure. Where double bonds are concerned, 5-exo and 6-exo pathways operate preferentially as long as structural strain is not excessive. When the reaction center is a carbon-carbon triple bond, the first cyclization gives rise to vinyl radicals that hold sufficient reactivity to capture solvent benzene. In the case of 45, this sequential reaction leads importantly to the introduction of a styrene functionality sufficiently activated to allow a second ring closure to be kinetically feasible. The solid-state structural features of 12 and 17 have been elucidated by X-ray crystallographic methods. Despite key differences from the norm in the alignment of the nitrogen lone pair relative to the adjacent sulfonyl groups, these compounds exhibit good hydrolytic stability. For 13, generation of the alpha-sulfonamide carbanion is possible and regiospecific oxidation with chromyl acetate has been achieved.

Anti-Infective Agents↗

A [[TiCl2(isodiCp)]2(mu-O)] dimer and a twinned cyclic [TiCl(isodiCp)(mu-O)]4 tetramer.

The mu-oxo dimer mu-oxo-bis[dichloro[(1,2,3,3a,7a-eta)- 4,5,6,7-tetrahydro-4,7-methano-1H-indenyl]titanium], [Ti2Cl4(mu-O)(C10H11)2], and the mu-oxo cyclic tetramer, cyclo-tetra-mu-oxo-tetrakis[chloro[(1,2,3,3a,7a-eta)-4,5,6,7-tetrahydro- 4,7-methano-1H-indenyl]titanium], [Ti4Cl4(mu-O)4(C10H11)4], have been synthesized by electrophilic attack of TiCl4 on the exo-trimethylsilyl derivative of isodiCp (isodiCp is the isodicyclopentadienide anion or 4,5,6,7-tetrahydro-4,7-methano-1H-indene) in the presence of trace amounts of moisture. Both structures are endo isomers, with each Ti atom bonded in a eta 5 manner to the Cp ring of the isodiCp ligand. Both display a slight bending of the isodiCp group about the bond common to the Cp ring and the norbornane fragment, such that the norbornane group is displaced in the direction away from the Ti atom. The dihedral angles which describe this bending are 9.0 (3) and 10.2 (3) degrees for the dimer, and 9.2 (2) degrees for the tetramer. The dimer contains a bent Ti-O-Ti angle of 159.5 (2) degrees. The tetramer forms tetragonal crystals, which are twinned by merohedry on the (110) plane. The tetramer molecule contains a crystallographic 4 axis, with the Ti atoms linked by the O atoms in a mu-oxo manner to form an eight-membered ring.

Crystallography, X-Ray↗

endo and exo isomers of isodicyclopentadienyltrichlorotitanium.

The diastereomeric endo and exo isomers of the title complex, [TiCl3(C10H11)], have been synthesized by electrophilic attack of TiCl4 on the exo- or endo-trimethylsilyl derivative of isodiCp (isodiCp = isodicyclopentadiene). This reaction proceeds with net inversion of configuration to give exclusively either the endo- or exo-(isodiCp)TiCl3 compound. Although the two isomers have similar unit-cell constants, they crystallize in different space groups. The endo complex, (2), is in Pbcm with a crystallographic mirror plane, while the exo complex, (4), is in Pca2(1) with pseudo-mirror symmetry. Both molecules display a distorted tetrahedral geometry about the Ti atom. Each Ti atom is bonded in a eta(5) manner to the Cp ring of the isodiCp ligand, with Ti--ring centroid distances of 2.031 (2) and 2.013 (2) A for (2) and (4), respectively. A slight bending of the isodiCp ligand about the bond shared by the Cp ring and the norbornane fragment is observed in both structures. The determination of the absolute structure of (4) defines the directionality of the packing along the polar c axis.

Crystallography, X-Ray↗

Two derivatives of lithium isodicyclopentadienide: [(1,2,3,3a,7a-eta)-4,5,6,7-tetrahydro-4,7-methanoindenido] (N,N,N1,N1-tetramethylethylenediamine)lithium and Bis (1,4,7,10-tetraoxacyclododecane)-lithium(1+) Bis[(1,2,3,3a,7a-eta)-4,5,6,7-tetrahydro-4,7-methanoindenido]lithate(1- ).

Selective crystallization of a solution of lithium isodicyclopentadienide, (isodiCp)Li, in dry thf or diethyl ether under argon has produced two lithium complexes: (isodiCp)Li(TMEDA), [Li(C10H11)(C6H16N2)], (4), and [Li(12-crown-4)2]+. [Li(isodiCp)2]-, [Li(C8H16O4)2]-[Li(C10H11)2], (5). In (4) the Li+ ion is coordinated to the two N atoms of the disordered TMEDA and is eta 5-coordinated to the Cp ring of the isodiCp ligand. The Li-(Cp ring centroid) distance is 1.906 (7) A. In (5) there are two independent half-molecules of the anion and one molecule of the cation in the asymmetric unit. In each anion, the Li+ ion occupies a crystallographic inversion center and is eta 5-coordinated to the two Cp rings of two isodiCp ligands. The Cp rings are in a staggered arrangement, as required by the inversion center. The Li-(Cp ring centroid) distances for the two anions are 1.987 (3) and 2.008 (3) A. In the cation of (5), the Li+ ion is coordinated to two 12-crown-4 ligands, one of which is disordered. Both (4) and (5) exhibit exo coordination of the Li+ ion to the isodiCp ligand, with a resultant slight endo bending of this ligand.

Crystallization↗

(Z)-5-(2-thienylmethylene)-2,4-imidazolidinedione.

The major product formed in the thermolysis of 5-diazouracil in thiophene at 423-433 K has been identified as the unexpected compound (Z)-5-(2-thienylmethylene)-2,4-imidazolidinedione, C8H6N2O2S, by X-ray analysis. The molecule is a hydantoin derivative with a thienylmethylene group substituted at the 5-position. The structure is disordered in that the thiophene ring exists in two orientations which are related by an approximate 180 degree rotation about the C(6)-C(7) bond. All of the N and O atoms are involved in an intermolecular hydrogen-bonding network via N-H...O interactions. This network consists of an infinite chain along the a-axis direction and a cyclic trimer arrangement which branches from this chain. The molecules are arranged in the unit cell in pleated sheets which are approximately perpendicular to the c axis.

Crystallography, X-Ray↗

Structure of 6-fluoro-1,2,3,4,7,12-hexahydro-7-methyl-12-methylene- benz[a]anthracene.

The X-ray analysis confirms the structure of the 12-methylene tautomer formed by the acid catalysis of 6-fluoro-1,2,3,4-tetrahydro-7,12-dimethylbenz[a]anthracene. The central C ring is in a boat conformation, with the result that the molecule is bent about a line through atoms C(7) and C(12) with a dihedral angle of 32.5 degrees. The cyclohexene A ring is in a half-chair conformation.

Benz(a)Anthracenes↗

Structure of dibenzofuran-d8, C12D8O, at 173 K.

Crystalline dibenzofuran-d8 has been found to exhibit disorder of the type described previously for dibenzofuran. The disordered molecules are related to the ordered molecules by a 180 degrees rotation about an axis passing through the molecular center of mass and perpendicular to the furan ring. In the present structure 11(2)% of the molecules were found to adopt this alternate orientation. The molecules are bisected by a mirror plane normal to the furan ring and containing the O atom. The average bond length in the benzenoid ring is 1.392 (10) A. The furan ring and the benzenoid ring are separately planar, but form a dihedral angle of 1.45 (9) degrees with each other.

Benzofurans↗

Structure of tetralithium 1,4,5,8-naphthalenetetracarboxylate dodecahydrate.

4Li+.C14H4O8(4-).12H2O, M(r) = 544.18, triclinic, P1, a = 9.608 (2), b = 10.034 (2), c = 7.033 (1) A, alpha = 94.29 (1), beta = 96.95 (1), gamma = 64.52 (1) degree, V = 607.4 (2) A3, Z = 1, D chi = 1.49 g cm-3, lambda (Mo K alpha) = 0.71073 A, mu = 1.29 cm-1, T = 295 K, F(000) = 284, R = 0.039 for 2781 unique reflections having I greater than sigma I. The two inequivalent carboxyl groups adopt a non-planar arrangement with respect to the naphthalene core, making dihedral angles of 52.7 (1) and 54.6 (1) degree with it. The Li+ ions are tetrahedrally coordinated by carboxyl and water O atoms. The Li-O distances are in the range 1.906 (3)-2.041 (3) A, averaging 1.97 (4) A; O-Li-O angles are 101.5 (1)-123.9 (1) degree, averaging 109 (6) degrees. Each of the 12 inequivalent water H atoms is involved in hydrogen bonding. Of these bonds, 11 are typical two-centered hydrogen bonds with an average H...O (acceptor) distance of 1.92 (11) A and an average O-H...O (acceptor) angle of 172 (5) degrees. One water H atom is involved in a three-centered hydrogen bond with an average H...O (acceptor) distance of 2.61 (4) A and an average O-H...O (acceptor) angle of 120 (3) degrees. Adjacent organic anions are separated by the Li+ ions and their coordination polyhedra, with the water molecules occupying positions above and below the naphthalene rings and participating in a three-dimensional hydrogen-bonded network.

Crystallization↗

The structure of hexaaquaaluminium(III) bromate trihydrate, [Al(H2O)6](BrO3)3.3H2O.

Hexaaquaaluminium(III) bromate trihydrate, [Al(H2O)6](BrO3)3.3H2O, M(r) = 572.84, triclinic, P1, a = 9.536 (2), b = 11.095 (4), c = 9.291 (2) A, alpha = 106.58 (2), beta = 100.42 (2), gamma = 113.01 (2) degrees, V = 818.1 (4) A3, Z = 2, Dx = 2.33 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 74.58 cm-1, F(000) = 560, T = 296 K, R = 0.050 for 3777 unique reflections having I greater than sigma 1. The single type of Al ion is coordinated by six inequivalent water O atoms which form a slightly distorted octahedron. The average Al--O distance within the octahedron is 1.872 (11) A. Each of the three inequivalent bromate groups has three inequivalent O atoms. The average Br--O distances and O--Br--O angles for these ions are: 1.652 (25) A and 104.1 (17) degrees for Br(1)O3; 1.650 (9) A and 104.4 (18) degrees for Br(2)O3; 1.643 (9) A and 103.6 (14) degrees for Br(3)O3. The aluminium-oxygen complex conformed to rigid-body behavior but the bromate groups did not. Corrected for rigid-body motion, the average Al--O distance becomes 1.880 (10) A. Least-squares refinement of the positional parameters of the 18 inequivalent H atoms permitted a detailed analysis of the hydrogen bonding.

Aluminum↗

1,2-Naphthalenedicarboxylic acid: structures of channel clathrates and an unsolvated crystalline phase.

(1) 1,2-Naphthalenedicarboxylic acid-diethyl ether, C12H8O4.nC4H10O, M(r) = 216.19, tetragonal, I4(1)/a, a = 22.086 (3), c = 9.463 (3) A, V = 4616 (2) A3, Z = 16, F(000) = 1792 (without ether), F(000) = 1873 (with 2.7 molecules of ether per unit cell), Dx = 1.24 g cm-3 (without ether), Dx = 1.31 g cm-3 (with 2.7 molecules of ether per unit cell), lambda(Mo K alpha) = 0.71073 A, T = 296 K, mu = 0.88 cm-1, R = 0.052 for 1130 unique reflections having I greater than 3 sigma I. (2) 1,2-Naphthalenedicarboxylic acid, C12H8O4, M(r) = 216.19, triclinic, P1, a = 9.027 (1), b = 9.234 (1), c = 7.256 (1) A, alpha = 106.08 (1), beta = 90.79 (1), gamma = 111.80 (1) degrees, V = 535.0 (1) A3, Z = 2, F(000) = 224, Dx = 1.34 g cm-3, lambda (Mo K alpha) = 0.71073 A, T = 296 K, mu = 0.95 cm-1, R = 0.043 for 1216 unique reflections having I greater than 3 sigma I. (3) 1,2-Naphthalenedicarboxylic acid-dimethoxyethane, C12H8O4.nC4H10O2, M(r) = 216.19, tetragonal, I4(1)/a, a = 22.067 (2), c = 9.465 (2) A, V = 4609 (1) A3, Z = 16, Dx = 1.25 g cm-3 (without dimethoxyethane), Dx = 1.39 g cm-3 (with 4.4 molecules of dimethoxyethane per unit cell), lambda(Mo K alpha) = 0.71073 A, T = 296 K.(ABSTRACT TRUNCATED AT 250 WORDS)

Clathrin↗

Structure of sodium perbromate monohydrate.

NaBrO4.H2O, Mr = 184.90, monoclinic, C2/c, a = 15.7575 (19), b = 5.7373 (15), c = 11.3390 (19) A, beta = 111.193 (10)degrees, V = 955.8 (3) A3, Z = 8, Dx = 2.570 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 85.2 cm-1, F(000) = 704, T = 296 K, R = 0.039 for 1137 unique reflections having I greater than sigma I. In this structure, there are two inequivalent Na ions, each coordinated by six O atoms. In each of the two types of distorted octahedra, there are three inequivalent Na--O distances; the average Na(1)--O and Na(2)--O distances are 2.379 (10) and 2.405 (23) A, respectively. The perbromate ion in this structure displays very nearly regular tetrahedral geometry, although it is subject to no symmetry constraints; the average observed Br--O distance is 1.601 (4) A, while the average observed O--Br--O angle is 109.5 (9)degrees. These values agree well with previously reported values. The perbromate ion, but neither of the sodium coordination polyhedra, shows rigid-body behavior. The average rigid-body corrected Br--O distance in the perbromate ion is 1.624 (3) A. Refinement of the two inequivalent H atoms permitted detailed analysis of the hydrogen bonding, which is slightly different from that reported for the isomorphic sodium perchlorate monohydrate. Dynamic disordering of the H atoms as detailed by magnetic resonance methods for sodium perchlorate monohydrate is not clearly indicated in our X-ray study of sodium perbromate monohydrate.

Bromates↗

Structure of the sodium salt of 1,4,5,8-naphthalenetetracarboxylic acid 4,5-anhydride hydrate.

Sodium hydrogen 1,3-dioxo-1H,3H-naphtho[1,8-cd]pyran-6,7-dicarboxylate hydrate, Na[C14H5O7].H2O, Mr = 326.2, triclinic, P1, a = 9.520 (2), b = 9.549 (3), c = 7.860 (1) A, alpha = 105.88 (2), beta = 110.29 (1), gamma = 100.89 (2) degrees, V = 611.9 (3) A3, Z = 2, Dx = 1.77 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 1.67 cm-1, F(000) = 332, T = 295 K, R = 0.042 for 1665 unique reflections having I greater than 3 sigma I. The organic portion of this structure demonstrates near-C2 symmetry with a pseudo-twofold axis coincident with the central C-C naphthalene ring bond. The atoms of the naphthopyran three-ring system deviate by an average of 0.037 (19) A from the best least-squares plane through the three rings. Each of the carboxyl group planes is substantially inclined to the naphthopyran ring plane, the average dihedral angle measuring 62 (1) degree. The Na ion is coordinated by O atoms in a highly distorted octahedral geometry with a mean Na--O distance of 2.49 (12) A. A short hydrogen bond is formed between a carboxylic acid group and a carboxylate anion; the H...O(acceptor) distance is 1.35 (5) A and the O...O(acceptor) distance is 2.475 (3) A. The acid H-atom position is located asymmetrically with respect to the O atoms. The water H atoms are involved in unequal three-centered hydrogen bonds. The molecules are stacked such that the naphthopyran ring portion of the structure is nearly parallel to the ab cell face and the stacks are connected by the hydrogen bonds.(ABSTRACT TRUNCATED AT 250 WORDS)

Chemical Phenomena↗

Modulation of carcinogenicity in 1,2,3,4-tetrahydro-7,12- dimethylbenz[a]anthracene (THDMBA) by fluorine substitution: crystal structures of the 5- and 6-fluoro regioisomers.

1,2,3,4-Tetrahydro-7,12-dimethylbenz[a]anthracene (THDMBA) is an animal carcinogen which lacks an aromatic bay-region and shows promise as a model to investigate non-classical mechanisms of carcinogenesis. The fluorine-substituted derivatives at positions 5 and 6 on the B-ring exhibit a striking range of oncogenic potential wherein the 6F-THDMBA is twice as potent as the parent carcinogen, but the 5F-THDMBA is virtually inactive. To study structure-reactivity relationships for these fluorine regioisomers, we have determined the three-dimensional structures of the compounds by single-crystal X-ray diffraction. These crystal structures are the first such to be reported for any monofluoro anthracene (or pyrene) derivative. The partially-reduced A-ring exists in both enantiomeric half-chair conformers in the crystalline state, and the compounds have quasi-planar anthracene ring systems which exhibit a right-handed twist in the 'beta'-conformer, with the expected opposite twist in the other. A complete analysis of bond lengths, bond angles and torsion angles is presented. Preliminary electrostatic potentials have been derived from the X-ray data sets, and the results indicate significant differences in potential between 5F- and 6F-THDMBA at positions near the partially reduced bay region. Such results are likely to be of importance in the understanding of metabolic activation to reactive intermediates capable of bonding covalently to DNA.

9,10-Dimethyl-1,2-benzanthracene↗

Structure of tetrasodium 1,4,5,8-naphthalenetetracarboxylate octahydrate.

Na4[C14H4O8].8H2O, Mr = 536.3, monoclinic, P2(1)/n, a = 6.142 (1), b = 8.144 (3), c = 20.527 (4) A, beta = 93.97 (1) degrees, V = 1024.4 (5) A3, Z = 2, Dx = 1.74 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 2.14 cm-1, F(000) = 552 T = 295 K, R = 0.039 for 1769 unique reflections having I greater than sigma I. In this structure, the title compound has an inversion center at the midpoint of the central naphthalene ring bond. The average C-C bond length in the naphthalene core is 1.41 (3) A; the average interior angle is 119.9 (1.0) degrees. The exterior angle at the central naphthalene carbon is 122.7 (3) degrees, significantly smaller than in 1.8-substituted naphthalenes. The two inequivalent carboxyl groups adopt a non-planar arrangement with respect to the naphthalene core, making an average dihedral angle of 53.8 (1) degree with it. The two inequivalent sodium ions have quite different environments. Na(1) is coordinated by six O atoms in a highly distorted octahedral arrangement with an average Na-O distance of 2.44 (10) A. Na(2) is coordinated by five O atoms in a highly distorted trigonal bipyramidal arrangement with an average Na-O distance of 2.36 (3) A. Each of the eight inequivalent water H atoms is involved in a single hydrogen bond. The average H...O (acceptor) distance is 2.00 (5) A, the average O...O (acceptor) distance is 2.85 (5) A and the average O-H...O (acceptor) angle is 165 (8) degrees for these hydrogen bonds.(ABSTRACT TRUNCATED AT 250 WORDS)

Crystallography↗

Structure of 4-dibenzofurancarboxaldehyde, C13H8O2.

Mr = 196.21, monoclinic, P2(1)/n, a = 6.589 (1), b = 9.784 (2), c = 14.394 (2) A, beta = 95.69 (1) degrees, V = 923.4 (3) A3, Z = 4, Dx = 1.41 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 0.89 cm-1, F(000) = 408, T = 296 K, R = 0.048 for 964 unique reflections having I greater than 3 sigma I. The average C-C bond length within the benzenoid rings in 4-dibenzofurancarboxaldehyde is 1.388 (9) A; the average interior angle is 120.0 (2.6) degrees. While two of the three rings of 4-dibenzofurancarboxaldehyde are planar, the benzenoid ring to which the carbonyl group is attached is slightly non-planar. The dihedral angle between the two benzenoid rings measures 1.4(1) degrees. The structure is composed of pairs of 4-dibenzofurancarboxaldehyde molecules related by inversion centers. This structure is further characterized by approaches of both the carbonyl and the furan O atoms to ring H atoms with separations which are slightly less than the sum of the relevant van der Waals radii.

Benzofurans↗