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J C Gallucci

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Structure of hexaaquacopper(II) bromate.

[Cu(H2O)6](BrO3)2, Mr = 427.44, cubic, Pa3, a = 10.3240 (6) A, V = 1100.38 (4) A3, Z = 4, Dx = 2.580 g cm-3, lambda (Mo K alpha) = 0.71073 A, mu = 92.32 cm-1, F(000) = 828, T = 296 K, R = 0.038 for 336 unique reflections having I greater than sigma I. The single type of copper ion (site symmetry 3) is coordinated by six water-molecule O atoms, each at an observed distance of 2.079 (4) A, in an array which is virtually regular octahedral, the nominal 90 degree angles measuring 89.95 (15) and 90.05 (15) degrees. Thus, this is not a typical CuII complex in which (consistent with a static Jahn-Teller effect) a distorted octahedral array displays '(2 + 2 + 2)' coordination; rather, it is the sixth strict example of a CuII static structure inconsistent with the Jahn-Teller theorem. The presence of a dynamic Jahn-Teller effect is supported by the data. The single type of bromate ion has an observed Br-O bond length 1.649 (3) A and O-Br-O bond angle 104.17 (15) degrees. The bromate ion was found to manifest rigid-body behavior but, consistent with a dynamic Jahn-Teller effect, the copper-oxygen complex did not. The Br-O bond length corrected for rigid-body motion is 1.663 A. Refinement of the positional parameters of the two inequivalent H atoms permitted a detailed analysis of hydrogen bonding, which occurs principally between the oxygen octahedra and the bromate groups.(ABSTRACT TRUNCATED AT 250 WORDS)

Bromates↗

Structure of 1,8-naphthalenedicarboxylic acid (naphthalic acid), C12H8O4: ring geometry and hydrogen-bonding effects.

C12H8O4, Mr = 216.19, orthorhombic, Pbca, a = 15.308 (2), b = 17.926 (2), c = 7.093 (2) A, V = 1946.4 (5) A3, Z = 8, Dx = 1.48 g cm-3, lambda (Mo K alpha) = 0.71073 A, mu = 1.05 cm-1, F(000) = 896, T = 296 K, R = 0.043 for 912 unique reflections having I greater than 3 sigma (I). In this structure, 1,8-naphthalenedicarboxylic acid departs significantly from planarity. While the average deviation of carbons from the best least-squares plane for the naphthalene core is 0.055 (4) A, the carboxyl carbons adopt positions +0.403 (4) and -0.350 (4) A from that plane. The carboxyl groups are twisted in the same direction with respect to that plane and make an average dihedral angle of 42.6 (3) degrees with it. The nearly equal lengths of the C--O distances within the carboxyl groups [mean value 1.267 (5) A] indicate almost complete disorder of the H atoms of these groups. Hydrogen bonding occurs in cyclic dimer fashion between two molecules related by a center of inversion. The carboxyl hydrogens appear to be subject to a symmetric double-minimum potential and to be disordered via tunneling; there is no evidence that the carboxyl oxygens are disordered. The mean carboxyl H--O acceptor distance is 1.90 (7) A.

Molecular Conformation↗

Structure of diethyl 1,2,3,3b,4a,5,6,7,8,8a,8b,9-dodecahydro-1,5-dioxo-4,8,9-metheno-4H-cycl openta [1,2-a:4,3-a']dipentalene-4,10-dicarboxylate.

C24H24O6, Mr = 408.45, triclinic, P1, a = 10.276 (2), b = 13.000 (2), c = 7.782 (1) A, alpha = 98.06 (1), beta = 97.63 (1), gamma = 84.43 (1) degree, V = 1017 A3, Z = 2, Dx = 1.33 g cm-3, lambda(Mo K alpha) = 0.71069 A, mu = 0.89 cm-1, F(000) = 432, T = 296 K, R = 0.048 for 3321 unique reflections with Fo2 greater than 3 sigma(Fo2). Both cyclopentenones are canted in the endo direction (6.0 and 7.9 degrees), the one syn to the ethoxy groups less so for steric reasons. When the ester groups are disregarded, the polyquinane portion of the molecule is seen to possess a non-crystallographic twofold axis. The overall molecular geometry is reconcilable with the absence of any significant alteration in the density maximum of the C--C pi bonds at this level of downward pyramidalization.

Bridged-Ring Compounds↗

Structure of hexaaquanickel(II) bromate.

[Ni(H2O)6](BrO3)2, Mr = 422.60, cubic, Pa3, a = 10.2987 (6) A, V = 1092.3 (2) A3, Z = 4, F(000) = 824, Dx = 2.57 g cm-3, lambda(Mo K alpha) = 0.71073 A, mu = 90.79 cm-1, T = 296 K, R = 0.024 for 360 unique reflections having I greater than sigma I. The single type of nickel ion is coordinated by six water-molecule O atoms, each at an observed distance of 2.061 (2) A, in an almost regular octahedral array. The single type of bromate ion has an observed Br--O bond length of 1.655 (2) A and O--Br--O bond angle 104.25 (9) degrees. Both the nickel-oxygen complex and the bromate ion were found to manifest rigid-body behavior. The Ni--O distance corrected for rigid-body motion is 2.065 A, while the corrected Br--O bond length is 1.663 A. Location and refinement of the two inequivalent H atoms permitted a detailed analysis of the hydrogen bonding, which occurs principally between the oxygen octahedron and the bromate groups. This structure is isomorphic to the structures of hexaaquanickel(II) chlorate and hexaaquacobalt(II) bromate which have been reported recently from this laboratory.

Bromates↗

Structure of tetraaquacopper(II) chlorate at 296 and 223 K.

[Cu(H2O)4](ClO3)2, Mr = 302.51, orthorhombic, Pbca, lambda (Mo K alpha) = 0.71069 A, Z = 4, F(000) = 604; T = 296 K, a = 12.924 (3), b = 9.502 (2), c = 7.233 (1) A, V = 888.3 (3) A3, D chi = 2.26 g cm-3, mu = 31.04 cm-1, R = 0.041 for 1174 unique reflections with I greater than sigma (I); T = 223 K, a = 12.853 (2), b = 9.492 (2), c = 7.216 (2) A, V = 880.4 (3) A3, D chi = 2.28 g cm-3, mu = 31.28 cm-1, R = 0.033 for 1279 unique reflections with I greater than sigma (I). The single type of copper ion is octahedrally coordinated by four water oxygens and two chlorate ion oxygens; the complex is characterized by three distinct pairs of Cu-O distances (which we have previously described as '2 + 2 + 2' coordination), one of which is substantially larger than the remaining two. The nominal 90 degrees O-Cu-O angles of the complex differ from that value by at most +/- 1.8 degrees. The observed structure of the complex is typical for copper(II) and is consistent with the Jahn-Teller effect. The single type of chlorate ion shows the expected trigonal pyramidal geometry, with average Cl-O bond lengths 1.485 (13) and 1.490 (11) A and average O-Cl-O bond angles 106.8 (13) and 106.8 (13) degrees for 296 and 223 K, respectively.(ABSTRACT TRUNCATED AT 250 WORDS)

Chemical Phenomena↗

Structure of phenoxathiin (phenothioxin), C12H8OS, at 223 K.

Mr = 200.25, orthorhombic, P2(1)2(1)2(1), a = 7.758(2), b = 20.506(3), c = 5.896(2) A, V = 938.0(4) A3, Z = 4, Dx = 1.42 g cm-3, lambda(Mo K alpha) = 0.71069 A, mu = 2.88 cm-1, F(000) = 416, T = 223 K, R = 0.044 for 1414 unique reflections having I greater than 3 sigma I. The phenoxathiin molecule is constituted of two very nearly regular planar hexagonal carbocyclic (benzenoid) rings joined to a non-planar heterocyclic ring. The heterocyclic ring geometry is described in terms of two intersecting planes between which the dihedral angle, the molecular fold angle, is 142.3 degrees. The angle at S (C-S-C) is 97.7(1) degrees, while the angle at O (C-O-C) is 117.4(2) degrees. The overall mean C-C distance in the carbocyclic rings is 1.387(7) A. The absence in this structure of the type of disorder previously found in the dibenzofuran structure is readily understandable since eight sets of close approaches involving each molecule were found in the present structure. These close approaches involve S and O atoms as well as H atoms.

Heterocyclic Compounds↗

Structure of tetraaquacobalt(II) bromide dihydrate (cobalt bromide hexahydrate).

Tetraaquacobalt(II) bromide dihydrate, [Co(H2O)4]Br2 x 2H2O, Mr = 326.83, monoclinic, C2/m, a = 11.0158(12), b = 7.1694(10), c = 6.9111(10) A, beta = 124.761(7)degrees, V = 448.4(1) A3, Z = 2, F(000) = 314, Dx = 2.420 g cm-3, lambda(Mo K alpha) = 0.71069 A, T = 296 K, mu = 107.13 cm-1, R = 0.022 for 532 unique reflections having I greater than 0. The single type of Co ion is octahedrally coordinated by four equivalent water-molecule O atoms at the observed distance 2.081(2) A and two equivalent Br ions at the observed distance 2.6048(5) A in an array which, with respect to its angles, departs only slightly from regular octahedral geometry. The cobalt-oxygen-bromine complex was found to manifest rigid-body behavior. The cobalt-oxygen distance corrected for rigid-body motion was found to be 2.088 A; the corrected cobalt-bromine distance, 2.6081 A. Associated with each complex are two water molecules of hydration. Assignment and refinement of the coordinates of the four non-equivalent H atoms permitted detailed analysis of the hydrogen bonding, which involves each of the four non-equivalent H atoms significantly. The structure as determined in this study differs markedly from that presented in the sole published single-crystal study [Stroganov, Andreev, Kozina & Solov'ev (1961). Vestn. Leningr. Univ. Ser. Mat. Fiz. Khim. 16, 114-119]. In particular, the space-group assignment differs and the pattern of bromine-oxygen distances is quite different. Contrary to Stroganov et al., this structure is isomorphic with that of cobalt chloride hexahydrate.

Bromides↗

Structure of hexaaquacobalt(II) bromate.

[Co(H2O)6](BrO3)2, Mr = 422.83, cubic, Pa-3, a = 10.3505 (7) A, V = 1108.88 (8) A3, Z = 4, Dx = 2.53 g cm-3, lambda(Mo K-alpha) = 0.71069 A, mu = 87.31 cm-1, F(000) = 820, T = 296 K, R = 0.027 for 365 unique reflections having I greater than sigma I. The single type of Co ion is coordinated by six water-molecule O atoms, each at an observed distance 2.095 (2) A, in an array which is regular octahedral within the estimated standard deviations of the relevant angles. The single type of bromate ion has a Br-O bond length 1.653 (2) A and O-Br-O bond angle 104.07 (9) degrees. The cobalt-oxygen complex manifested rigid-body behavior, but the bromate ion did not. The cobalt-oxygen distance corrected for rigid-body motion is 2.099 A. Location and refinement of the two inequivalent H atoms permitted detailed analysis of the hydrogen bonding, which occurs principally between the oxygen octahedra and the bromate groups. This structure is isomorphic to that of hexa-aquanickel(II) chlorate recently reported from this laboratory.

Bromates↗

Structure of nickel(II) perbromate hexahydrate at 296 K.

Ni(BrO4)2.6H2O, Mr = 454.61, trigonal, P3, a = 7.874 (1), c = 5.423 (2) A, V = 291.2 (1) A3, Z = 1, D chi = 2.59 g cm-3, lambda(Mo K alpha) = 0.71069 A, mu = 85.36 cm-1, F(000) = 222, T = 296 K, R = 0.029 for 457 unique reflections having I greater than 0. The room-temperature structure is very similar to that reported previously for a sample at 169 K. The water O atoms form a very slightly distorted octahedron about nickel while the perbromate-ion geometry is virtually regular tetrahedral. Both the coordination polyhedron and the perbromate ion were tested and found to behave as rigid bodies. Corrected for rigid-body motion, the Ni--O(2) distance is 2.064 (2) A and the mean Br--O distance in the perbromate ion is 1.629 (3) A. A detailed account of the hydrogen bonding is presented. The structure previously determined at 169 K is most probably not the stable structure at that temperature.

Bromates↗

The structure of hexaaquanickel(II) chlorate.

Hexaaquanickel(II) chlorate, [Ni(H2O)6]-(ClO3)2, Mr = 333.69, cubic, Pa3-, a = 10.3159 (5) A, V = 1097.80 (5) A3, Z = 4, F(000) = 680, Dx = 2.02 g cm-3, lambda(Mo K alpha-) = 0.71069 A, T = 296 K, mu = 23.13 cm-1, R = 0.026 for 388 unique reflections having I greater than sigma I. The single type of Ni ion is coordinated by six water-molecule O atoms, each at an observed distance 2.054 (1) A, in an almost regular octahedral array. The single type of chlorate ion has a Cl--O bond length 1.487 (1) A and O--Cl--O bond angle 106.45 (6) degrees. The Ni--O complex, but not the chlorate ion, manifested rigid-body behavior. The Ni--O distance corrected for rigid-body motion is 2.060 A. Location and refinement of the two inequivalent H atoms permitted a detailed analysis of hydrogen bonding, which occurs principally between the oxygen octahedra and the chlorate groups.

Chlorates↗

Structure of copper(II) perchlorate hexahydrate.

Cu(ClO4)2.6H2O, Mr = 370.54, monoclinic, P2(1)/c, a = 5.137 (1), b = 22.991 (3), c = 13.849 (2) A, beta = 90.66 (1) degree, V = 1635.4 (4) A3, Z = 6, Dx = 2.26 g cm-3, lambda(Mo K alpha) = 0.71069 A, mu = 26.44 cm-1, T = 296 K, F(000) = 1122, 2911 unique reflections having I greater than sigma 1, R = 0.030. Each of the two inequivalent copper ions is coordinated by six water-molecule O atoms in a significantly distorted octahedral arrangement. Each of the three inequivalent but geometrically quite similar perchlorate groups is slightly distorted from regular tetrahedral geometry. The overall observed mean Cl-O distance is 1.429 (5) A while the overall observed mean perchlorate O-O distance is 2.333 (8) A. Both the Cu-O complexes and the perchlorate ions were tested and found to behave as rigid bodies. The perchlorate-ion parameters corrected for rigid-body motion are: overall mean Cl-O distance, 1.453 (6) A; overall mean perchlorate O-O distance, 2.372 (8) A. Location and refinement of the 18 H atoms gave a detailed account of hydrogen bonding, which occurs between oxygen octahedra, between oxygen octahedra and perchlorate groups, and, more weakly, within oxygen octahedra.

Chemical Phenomena↗

X-ray crystallographic analysis of the structural distortions induced by substitution and annulation of the dodecahedrane nucleus.

Methyl dodecahedranecarboxylate, C22H22-O2, (4), Mr = 318.42, monoclinic, C2/c, a = 12.600 (2), b = 7.992 (4), c = 28.975 (7) A, beta = 101.79 (2) degrees, V = 2856 A3, Z = 8, Dx = 1.48 g cm-3, lambda(Mo K-alpha) = 0.71073 A, mu = 0.84 cm-1, F(000) = 1360, T = 294 K, R = 0.044 for 2109 unique reflections with Fo2 greater than 3 sigma(Fo2). 21-Phenylcyclopropadodecahedrane, C27H24, (5), Mr = 348.49, tetragonal, P4(2)/n, a = 17.528 (3), c = 10.752 (2) A, V = 3303 A3, Z = 8, Dx = 1.40 g cm-3, lambda(Mo K-alpha) = 0.71069 A, mu = 0.85 cm-1, F(000) = 1488, T = 295 K, R = 0.053 for the 1773 unique reflections with Fo2 greater than 1 sigma(Fo2). The molecular geometries of methoxycarbonyldodecahedrane (4) and 21-phenylcyclopropadodecahedrane (5) are compared to those of the parent C20H20 hydrocarbon (1) and its 1,16-dimethyl derivative (2). For both (2) and (4), the framework is modestly distorted by the substituents, the intracavity distance being more extended along the axis that contains the pendant group(s). Remarkably for (5), its cyclopropane ring has all C-C bonds and internal angles essentially equal, and those dodecahedrane bonds in the immediate vicinity of the ring fusion are extensively perturbed.

Molecular Structure↗

Synthesis and P-388 antitumor properties of the four diastereomeric 1-hydroxy-3,4-diaminocyclohexane-Cl2PtII complexes.

Synthesis and antileukemic activity in vivo of the four diastereomeric 1-hydroxy-3,4-diaminocyclohexane-Cl2PtII complexes (Cl2PtII-3a-d) are described. Respective bis(phenylmethyl) (1 alpha,2 alpha,4 beta)-, (1 alpha,2 alpha,4 alpha)-, (1 alpha,2 beta,4 beta)-, and (1 alpha,2 beta,4 alpha)-(4-hydroxy-1,2-cyclohexanediyl)bis(carbamates) (5a, 5b, 7a, 7b) were prepared by hydroboration-oxidation of the bis(carbobenzoxyamino) derivatives (4,5) of cis- and trans-4,5-diaminocyclohexene. The relative stereochemistry of intermediates 5a and 5b was established by correlation with the alcohol obtained by NaBH4 reduction of bis(phenylmethyl) (1 alpha,2 alpha,3 alpha,4 alpha)-(3,4-epoxy-1,2-cyclohexanediyl)bis(carbamate) (8), the all-cis stereochemistry of which was unambiguously determined by X-ray crystallographic analysis. In the P-388 murine leukemia model these monohydroxycyclohexanediamine-PtII complexes were more effective than the PtII complexes of the related diol diamines 1a-e but were less active than the cisplatin positive control.

Animals↗

Structure of barium perchlorate trihydrate.

Ba(ClO4)2.3H2O, Mr = 390.28, hexagonal, P63/m, a = 7.277 (2), c = 9.656 (1) A, V = 442.9 (1) A3, Z = 2, F(000) = 368, D chi = 2.93 g cm3, lambda(Mo K alpha) = 0.71069 A, T = 295 K, mu = 52.60 cm1, 456 unique reflections, R = 0.023. The barium atoms in this structure are coordinated by six water oxygens, O(3), at 2.919 (1) A and by six perchlorate oxygens, O(2), at 3.026 (2) A in a slightly distorted icosahedral arrangement, the average Ba-O separation thus being approximately 2.97 A. The perchlorate ion just fails to have regular tetrahedral geometry within the experimental error, and has an average Cl-O bond length of 1.433 (6) A. Consistent with hydrogen bonding delineated on the basis of least-squares-refined hydrogen-atom positions, each axial [O(1)] perchlorate oxygen is hydrogen bonded to three water molecules and each trigonal [O(2)] perchlorate oxygen is hydrogen bonded to two water molecules; thus each perchlorate ion is hydrogen bonded to nine water molecules. Conversely, each water molecule [O(3)] oxygen is hydrogen bonded to six perchlorate ions to two through axial [O(1)] oxygens and to four through trigonal [O(2)] oxygens.

Barium↗

Optically active catecholimidazolines: a study of steric interactions at alpha-adrenoreceptors.

The optical isomers and deoxy form of 2-(3,4, alpha-trihydroxybenzyl)imidazoline hydrochloride were examined for their alpha-adrenergic activity on rat aorta. The rank order of stimulant activity was deoxy (2) congruent to (R)-(-)-1 greater than (S)-(+)-1. This is in contrast to catecholamines in which the order of activity is (R)-(-)-epinephrine greater than (S)-(+)-epinephrine = epinine (deoxyepinephrine). The relative order of potency for the isomers of 2-(3,4, alpha-trihydroxybenzyl)imidazoline is different than that predicted by the Easson--Stedman theory for stereoisomers of catecholamines. Also, substitution of the deoxy compound 2 with substituents, methyl or benzyl, in the 4-position lowers the alpha-adrenergic agonist activity, and differences observed between optical isomers were small.

Animals↗