Biomedical subjects

Tadeusz Górecki

Publications and source records attributed to Tadeusz Górecki.

At least 19 recordsLinked to original sources

PubMed2006

Determination of polydimethylsiloxane-air partition coefficients using headspace sorptive extraction.

Polydimethylsiloxane-air partition coefficients (K(PDMS-A)) were determined using direct headspace analysis and headspace sorptive extraction (HSSE) with polydimethylsiloxane-coated (PDMS) stir bars. The partition coefficients were investigated for three compounds, p-dichlorobenzene (PDCB), naphthalene and camphor, all of which sublimate at room temperature and find use as moth repellents. In order to determine the K(PDMS-A) values of these compounds, the air concentration and the concentration present on PDMS, both at equilibrium, were measured. The results indicate that PDMS-air partition coefficients are proportional to octanol-air partition coefficients. Thus, the latter could be used to estimate the extraction efficiency of PDMS for these compounds in air. Alternatively, octanol-air partition coefficients for organic compounds could be estimated from the PDMS-air partition coefficient values. As expected, the PDMS-air (or octanol-air) partition coefficient increased with decreasing temperature. Importantly, the partition coefficients determined at saturated vapor pressures were lower than the values determined at lower analyte concentrations, with the differences being greater for compounds with larger partition coefficients. Consequently, caution should be exercised when applying K(PDMS-A) values determined at high analyte concentrations to measurements at lower concentrations, especially when the partition coefficients are large.

Air↗

PubMed2006

Determination of ergosterol as an indicator of fungal biomass in various samples using non-discriminating flash pyrolysis.

Ergosterol is the major sterol constituent of most fungi. Since it is present in negligible amounts in higher plants, it can be used as a chemical marker for the presence of fungal contamination. A number of different ergosterol assays have been developed for the quantification of fungi in various samples. The paper presents the development of a new method for ergosterol detection based on the combination of non-discriminating flash pyrolysis with gas chromatography/mass spectrometry (Py-GC/MS). The design of the non-discriminating Py-GC/MS systems assures efficient transfer of high-molecular-weight pyrolysis products to the GC column for separation, followed by analyte detection by MS. The method was tested on different types of samples, including baker's yeast (Saccharomyces cerevisiae), moldy bread, indoor dust, and a leaf infected with powdery mildew. Ergosterol was detected in all these samples at levels ranging from approximately 4 mg/g for the baker's yeast to approximately 6 microg/g for household dust. The main benefits of non-discriminating pyrolysis over other techniques include elimination of the need for sample preparation, small sample size required and short analysis time.

Biomass↗

PubMed2006

Comprehensive two-dimensional gas chromatography (GC x GC) in environmental analysis and monitoring.

Compared to conventional one-dimensional gas chromatography (1D-GC), comprehensive two-dimensional gas chromatography (GC x GC) offers increased peak capacity, improved resolution and enhanced mass sensitivity. In addition, it generates structured two-dimensional (2-D) chromatograms, which aids in the identification of compound classes. Sample preparation procedures can often be minimized, or even eliminated in some cases, due to the superior separating power offered by the technique. All of these advantages make GC x GC a very powerful tool in environmental analysis involving the determination of trace levels of toxic compounds in complex matrices. This review paper summarizes and examines the historical and recent GC x GC applications in environmental analysis and monitoring.

Journal Article↗

PubMed2006

Universal response in liquid chromatography using charged aerosol detection.

A new, empirical approach is introduced to correct for the varying response of aerosol-based detectors with the varying composition of the mobile phase during gradient elution in HPLC. A Corona charged aerosol detector was used in the experiments. The detector is characterized by a nearly universal response at a given, constant mobile-phase composition for sufficiently nonvolatile analytes. A second pump was used to deliver an exactly inverse gradient compared to the analytical HPLC system, and both flows were mixed in a tee piece before introduction to the Corona detector. The approach proposed made it possible to extend the universal response from isocratic to gradient elution conditions in HPLC, vastly improving the usefulness of this detection technique. The constant response of the detector obtained in this way was first demonstrated in flow injection analysis. Very similar calibration curves were obtained for six sulfonamide drugs after mobile-phase compensation. The approach was also applied to gradient elution with excellent results. The data were characterized by good precision ranging from 4% RSD at 10 mg/L to 1.6% RSD at 780 mg/L. The average limit of detection with a 2-microL injection was 0.5 mg/L, corresponding to 1 ng injected on the column. The approach proposed allows quantification of unknown compounds, e.g., in pharmaceutical mixtures. Measurement of analytes at a relative concentration of 0.05% versus the main component is demonstrated.

Aerosols↗

PubMed2006

Application of the chromatographic retention index system for the estimation of the calibration constants of permeation passive samplers with polydimethylsiloxane membranes.

The paper presents the results of research on the calibration of permeation passive samplers equipped with polydimethylsiloxane (PDMS) membranes using the physico-chemical properties of the analytes. Strong correlations were found between the calibration constants of the samplers and the linear temperature-programmed retention indices of the analytes determined on columns coated with pure PDMS (r2 = 0.914). These correlations make it possible to estimate the calibration constants for unidentified analytes, which is impossible when using conventional procedures. This, in turn, enables the deployment of permeation passive samplers in the same way in which active samplers are deployed. The reproducibility of the calibration constants determined in different laboratories and retention indices determined using different chromatographic systems was very good, indicating that the calibration constants estimated using this approach should be reproducible as well. The approach proposed should lead to more widespread use of permeation passive samplers.

Calibration↗

PubMed2005

Comparison of comprehensive two-dimensional gas chromatography in conventional and stop-flow modes.

A new mode of operation for comprehensive two-dimensional gas chromatography (GC x GC), stop-flow GC x GC, was introduced recently. In this technique, the flow in the primary column is stopped for a brief period of time during each modulation cycle, allowing for a secondary separation time that is longer than would otherwise be permitted by the modulation period in conventional GC x GC. This allows the modulation period and the secondary separation time to become independent variables, and greatly increases the flexibility of the system. In this paper, separations obtained under similar conditions for both conventional and stop-flow GC x GC are presented, demonstrating the advantages that stop-flow GC x GC provides over conventional GC x GC for certain separations.

Benzene Derivatives↗

PubMed2005

Effect of first-dimension column film thickness on comprehensive two-dimensional gas chromatographic separation.

In comprehensive two-dimensional gas chromatography (GC x GC), samples experience two-dimensional separation implemented by a modulator which helps preserve the first-dimension separation and facilitates the second-dimension separation by periodically collecting, focusing and launching the material from the primary column onto the secondary column with a different stationary phase. Column overloading in GC x GC is a considerable problem, aggravated by the fact that two columns are involved. Broad first-dimension peaks of an analyte help produce smaller fractions of the analyte in the second-dimension, reducing the chance of secondary column overloading. One of the means to generate broad peaks in the first-dimension is to use thick film primary columns. A series of primary columns of various film thickness were tested in the study, and the results indicate that when other conditions are kept constant, 1 microm film columns often provide better resolution in both first and second-dimension but at the expense of a much longer separation time; 0.1 microm is clearly inadequate for GC x GC separation; 0.5 and 0.25 microm film columns seem to be the best compromises.

Alkanes↗

PubMed2005

Flow model for coupled-column gas chromatography systems.

One of the challenges in performing comprehensive two-dimensional gas chromatographic separations is being able to predict the average linear velocities of the carrier gas in the two columns, especially when they have different diameters. The problem is compounded for loop-type modulators, where two thermal trapping zones that switch from hot to cold and back simultaneously are separated by a delay loop. If the linear velocity in the loop is not tuned to the length of the loop and the modulation period, the dual-stage modulation may cease to work properly. A model has been developed that calculates the flow rates in the columns and predicts appropriate delay loop dimensions for a given set-up. Additionally, the model determines the pressure ramp that needs to be used in order to maintain constant average linear velocity within the modulator loop throughout the course of the separation.

Chromatography, Gas↗

PubMed2005

Molecular composition of leaves and stems of genetically modified Bt and near-isogenic non-Bt maize--characterization of lignin patterns.

Transformation of crops, including maize (Zea mays L.), with the cry1Ab gene from Bacillus thuringiensis to combat lepidopteran pests results in pleiotropic effects regarding lignin biosynthesis. Lignin patterns in stems and leaves of two genetically modified Bt-maize varieties (Novelis T and Valmont T) were studied along with their non-Bt near-isolines (Nobilis and Prelude, respectively). Molecular-level based thermochemolysis using tetramethylammonium hydroxide (TMAH) in combination with gas chromatography-mass spectrometry (GC-MS) was used to quantitate the total lignin contents and to identify monomeric lignin subunits including p-hydroxyphenyl (P), guaiacyl (G), and syringyl (S) moieties. The results were supplemented and confirmed by cupric oxide oxidation. The stems of the transgenic lines had higher concentrations of total lignin than the respective isogenic lines: Valmont T/Prelude by 18% and Novelis T/Nobilis by 28%. In contrast, differences in the total lignin concentration of leaves between the transgenic and the respective near-isogenic lines were marginal. There were significant modifications in the ratio of p-hydroxyphenyl/guaiacyl/syringyl molecular marker units of stem lignin between transgenic and isogenic lines. The guaiacyl units (in particular the G18 marker) accounted chiefly for the higher total lignin contents in the transgenic lines. The leaf lignin patterns did not show significant differences in molecular markers between isogenic and transgenic lines. TMAH-induced thermochemolysis--conducted in both the on-line and off-line modes--provided detailed information on the molecular composition of lignin, thus proving superior to the established "wet chemistry" methods of lignin determination.

Analysis of Variance↗

PubMed2005

Volatile organohalogen compounds in human urine: the effect of environmental exposure.

The paper presents the results of determination of volatile organohalogen compounds (VOX) in urine samples from subjects exposed to these compounds in their workplaces and through consumption of chlorinated tap water. The analytes were isolated and preconcentrated from the complex urine samples using the thin layer headspace (TLHS) technique with autogenous generation of the liquid sorbent. Final gas chromatographic determination was carried out by direct aqueous injection with electron capture detection (DAI-ECD). The results indicate that only a small fraction (<4%) of the VOX input is excreted with urine in the non-metabolized form. A positive correlation was found between the occupational levels of VOX in the workplace and their levels in urine. VOX levels in the urine of subjects not exposed to them in the workplace were significantly lower. Their presence in the organisms was most probably related to consumption of tap water produced by chlorination of surface waters.

Drinking↗

PubMed2005

Characterization of non-discriminating tetramethylammonium hydroxide-induced thermochemolysis-capillary gas chromatography-mass spectrometry as a method for profiling fatty acids in bacterial biomasses.

Thermochemolysis using tetramethylammonium hydroxide (TMAH) as a method for profiling fatty acids (FAs) as methyl esters (FAMEs) was studied with respect to discrimination of bacterial fatty acid patterns in Gram-negative Pseudomonas putida in comparison with patterns obtained by classical preparation schemes (pressurized solvent extraction, alkaline saponification). A new, non-discriminating pyrolysis approach was used in these experiments. In this method, pyrolysis is carried out inside a deactivated stainless steel capillary constituting a part of the column train. This approach made it possible to distinguish analyte discrimination brought about by (i) the pyrolyzer set-up in conventional pyrolysis and (ii) chemical thermochemolysis reaction itself. Our results showed no significant discrimination for saturated, monounsaturated and cyclopropane FAs when using thermochemolysis temperatures up to 550 degrees C with the non-discriminating, capacitive-discharged based approach. Likewise, the cis/trans ratio of monounsaturated FAs was preserved. This is in sharp contrast to conventional pyrolysis systems (both Curie-point or flash pyrolyzers) using much longer thermochemolysis times. When using these systems, artificial monounsaturated FAMEs were formed during heat treatment resulting in biased species identification/classification. Hydroxy-FAs, chiefly bound covalently in lipopolysaccharides, could be almost quantitatively liberated by TMAH using non-discriminating pyrolysis (beyond 90%), whereas the recoveries were lower with conventional approaches. The new method makes it possible to profile fatty acids in very small amounts of both solid and liquid samples without significant sample preparation. This was exemplified by the results of TMAH-thermochemolysis of a fermentation broth taken from an in situ bioremediation reactor to monitor enhanced natural attenuation processes, and tomato roots which were subjected to cellulolytic bacteria attacks (Streptomyces), resulting in adsorption of these carboxymethyl-cellulose decomposing bacteria onto the root.

Biomass↗

PubMed2005

Overloading of the second-dimension column in comprehensive two-dimensional gas chromatography.

Comprehensive two-dimensional gas chromatography (GC x GC) is based on a coupling of two GC columns of different characteristics by means of a device that allows portions of the effluent from the primary column to be injected onto the second dimension column for an additional separation. The time available for the separation in the second-dimension column is very short. Thus, this separation should be very efficient. The vast majority of GC x GC practitioners use very narrow bore columns for the second dimension. While this approach is justified in principle, if peaks in the second dimension overload this column, its peak capacity is severely reduced. A series of second-dimension columns of varying internal diameters, but similar phase ratios, were used to study these effects. The results indicate that 250 microm columns often provide comparable second dimension peak widths to 100 microm columns, while at the same time being less prone to overloading, indicating that they may often be a better choice than smaller diameter columns in the second dimension of GC x GC systems.

Chromatography, Gas↗

PubMed2004

Comprehensive two-dimensional gas chromatography in stop-flow mode.

The theory and proof of concept of a new mode of operation for comprehensive two-dimensional gas chromatography (GC x GC) is presented. In current GC x GC interface designs, the modulation period defines the separation time allowed in the second dimension. In the stop-flow GC x GC mode, flow in the primary column is periodically stopped for brief periods of time. Consequently, the modulation period for the primary column and the amount of time available for second dimension separation become independent variables. This allows the separations in both the primary and secondary dimensions of the GC x GC system to be carried out under more optimised conditions, allowing extended periods of time for second dimension separations without sacrificing the separation in the primary dimension. This new technique has the potential to offer increased separation power and overall resolution as it is further developed.

Journal Article↗

PubMed2004

The evolution of comprehensive two-dimensional gas chromatography (GC x GC).

For a technology little over a decade old, comprehensive two-dimensional gas chromatography (GC x GC) has quickly reached the status of one of the most powerful analytical tools for volatile organic compounds. At the heart of any GC x GC system is an interface, which physically connects the primary and the secondary columns and acts to preserve the separation obtained in the first dimension (first column) while allowing additional separation in the second dimension. The paper presents a review of the technology, including fundamental principles of the technique, data processing and interpretation and a timeline of inventive contributions to interface design. In addition, applications of the technique are presented, with a more detailed discussion of selected examples.

Journal Article↗

PubMed2003

New liquid nitrogen cryogenic modulator for comprehensive two-dimensional gas chromatography.

A new liquid nitrogen (LN2) jet-based thermal modulator for performing comprehensive two-dimensional (2D) gas chromatographic (GC x GC) separations has been designed and constructed. Temperature measurements of the trapping zone, a segment of uncoated fused silica capillary, show that it can be cooled to -196 degrees C in about 300 ms. A film of liquid nitrogen develops on the outside of the trapping capillary even when the oven temperature is in excess of 200 degrees C. Compounds as volatile as propane can be trapped by the modulator and held for periods of at least 1 min without breakthrough. The peak widths for n-alkanes are on the order of 80 ms at half height after passing through an 80cm second dimension column. Repeated analysis of gasoline demonstrated excellent run-to-run reproducibility of the system.

Chromatography, Gas↗

PubMed2003

A novel technique for rapid extraction of volatile organohalogen compounds from low permeability media.

A new method for rapid extraction of Volatile Organic Compounds (VOC) from low permeability, unconsolidated geologic media such as clayey soil has been developed and tested using trichloroethylene (TCE) as the model compound. The technique is based on a combination of sonication and mechanical agitation of the samples. The sample vials, mounted in a special holder attached to an orbital shaker, were immersed in an ultrasonic bath during extraction. The extracts were analyzed by gas chromatography with electron capture detection (GC-ECD). The method was validated using clay samples from a TCE-contaminated industrial site by comparing TCE recoveries to those obtained by the standard methanol extraction. In all cases, the recoveries obtained with the new method were the same or better than the recoveries obtained with the reference method. The extraction time was shortened from 5 days with the standard method to less than 2 h with the new method. The new technique makes it possible to analyze a large number of samples in a short time, without the need for sample preservation and prolonged storage. It has good potential for on-site analysis to facilitate decisions while field investigations are in progress.

Aluminum Silicates↗

PubMed2003

Calibration of permeation passive samplers with silicone membranes based on physicochemical properties of the analytes.

Passive sampling is a very attractive alternative to active sampling due to its simplicity and low cost. Among the passive samplers used in air analysis, permeation passive samplers are the least affected by ambient conditions, including humidity, air currents, and temperature changes. The biggest drawback of permeation passive samplers is the need to calibrate them experimentally for each individual target analyte. The paper presents the results of research on the calibration of permeation passive samplers based on physicochemical properties of the analytes. Strong correlations were found between the calibration constants of the samplers and the number of carbon atoms among families of compounds (R2 ranging from 0.8507 for alcohols to 0.9995 for aromatic hydrocarbons), the molecular weights of the compounds (R2 = 0.8742), their boiling points (R2 = 0.8911), and linear temperature-programmed retention indexes (R2 = 0.9225). The last correlation makes it possible to estimate the calibration constants for unidentified analytes, which is impossible when the conventional procedure is used. This makes it possible to deploy permeation passive samplers in the same way in which active sampling is deployed.

Journal Article↗

PubMed2003

Optimized conditions for hydrocarbon group type analysis of base oils by thin-layer chromatography-flame ionisation detection.

The results of research on the optimization of the thin-layer chromatography-flame ionisation detection for the determination of group composition of natural base oils, including separation of the aromatics into subgroups, are presented. Neutral base oils obtained in several steps of refining from vacuum distillation petroleum fractions are the most difficult to analyze by hydrocarbon group type analysis (HGTA) because of the high content of aliphatic fragments in their molecules. Factors affecting the accuracy and precision of the results were identified. The paper presents the analytical procedure, including two different calibration methods, as well as the results of studies on the reproducibility of HGTA of typical base oils of different viscosity classes under the optimized conditions. The same conditions were found suitable for HGTA of other high-boiling petroleum fractions by TLC with flame ionisation detection. The paper also introduces a new procedure for reproducible determination of polar fractions in base oils utilizing solid-phase extraction columns, and presents a corrected procedure for the determination of saturated compounds and aromatics (mono-, bi- and polycyclic) in base oils by column liquid chromatography.

Calibration↗