SEGID: identifying interesting segments in (multiple) sequence alignments.

Lusheng Wang; Ying Xu

doi:10.1093/bioinformatics/19.2.297

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SEGID: identifying interesting segments in (multiple) sequence alignments.

Lusheng Wang·Ying Xu

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Abstract

SUMMARY: SEGID is a tool for finding conserved regions (regions of high scores) for a given (multiple) sequence alignment. It takes a (multiple) sequence alignment as its input and converts the alignment into a sequence of numbers, where each number is the alignment score of a column. Three algorithms are used to identify regions of high scores. A graphical interface is provided to present those identified regions. AVAILABILITY: Free from http://www.cs.cityu.edu.hk/~lwang/segid/subject to copyright restrictions.

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Algorithms Conserved Sequence Hypermedia Sequence Alignment Sequence Analysis Software Journal Article Research Support, Non-U.S. Gov't

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Lusheng Wang, Ying Xu. 2003-01-22. SEGID: identifying interesting segments in (multiple) sequence alignments.. https://doi.org/10.1093/bioinformatics%2F19.2.297

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