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PubMed · 6546437

Interactive computer programs for the graphic analysis of nucleotide sequence data.

V A Luckow·R K Littlewood·R H Rownd
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Abstract

A group of interactive computer programs have been developed which aid in the collection and graphical analysis of nucleotide and protein sequence data. The programs perform the following basic functions: a) enter, edit, list, and rearrange sequence data; b) permit automatic entry of nucleotide sequence data directly from an autoradiograph into the computer; c) search for restriction sites or other specified patterns and plot a linear or circular restriction map, or print their locations; d) plot base composition; e) analyze homology between sequences by plotting a two-dimensional graphic matrix; and f) aid in plotting predicted secondary structures of RNA molecules.

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Amino Acid SequenceBase SequenceComputersDNAMethodsMicrocomputersNucleic Acid ConformationPlasmidsProteinsSoftwareJournal ArticleResearch Support, U.S. Gov't, P.H.S.

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V A Luckow, R K Littlewood, R H Rownd. 1984-01-11. Interactive computer programs for the graphic analysis of nucleotide sequence data.. https://doi.org/10.1093/nar%2F12.1part2.665

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