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PubMed2006

Effect of side group chemistry on the properties of biodegradable L-alanine cosubstituted polyphosphazenes.

Biodegradable polyphosphazenes have been investigated for a variety of applications, such as controlled drug delivery matrixes, tissue-engineering scaffolds, membranes, and bone-type composites. In this study we have evaluated the effect of side group chemistry on the properties of biodegradable phosphazene polymers that contain ethyl alanato side groups together with ethyl glycinato, p-methylphenoxy, or p-phenylphenoxy side groups. The polymers were synthesized by a macromolecular substitution route. The molecular weights of aryloxy/amino acid ester cosubstituted polymers were much higher than the amino acid ester substituted polyphosphazenes described earlier. Polymer properties, such as glass transition temperature, hydrolytic degradation, surface wettability, tensile strength, and modulus of elasticity varied over a wide range following changes to the type of co-substituents on the polymer backbone. The glass transition temperatures varied from -10 to 35 degrees C and increased with the bulkiness of the side groups. Polymer films in phosphate buffer saline solution showed molecular weight declines ranging from 58% to >80% and mass loss ranging from 4% to 90% over a period of 7 weeks. Water contact angles for polymer films varied from 63 degrees to 107 degrees , with the highest angles for the alanine ethyl ester and p-phenylphenoxy cosubstituted polyphosphazene. The tensile strengths were in the range of 2.4-7.6 MPa and the modulus of elasticity was in the range of 31.4-455.9 MPa. Thus, in this study we have demonstrated the tunability of biodegradable polyphosphazenes to suit a range of biomedical applications.

Alanine↗

PubMed2007

Multifunctional polyelectrolyte multilayer films: combining mechanical resistance, biodegradability, and bioactivity.

Cross-linked polyelectrolyte multilayer films (CL PEM) have an increased rigidity and are mechanically more resistant than native (e.g., uncrosslinked) films. However, they are still biodegradable, which make them interesting candidates for biomedical applications. In this study, CL PEM films have been explored for their multifunctional properties as (i) mechanically resistant, (ii) biodegradable, and (iii) bioactive films. Toward this end, we investigated drug loading into CL chitosan/hyaluronan (CHI/HA) and poly(L-lysine)/hyaluronan (PLL/HA) films by simple diffusion of the drugs. Sodium diclofenac and paclitaxel were chosen as model drugs and were successfully loaded into the films. The effect of varying the number of layers in the (CHI/HA) films as well as the cross-linker concentration on diclofenac loading were studied. Diclofenac was released from the film in about 10 h. Paclitaxel was also found to diffuse within CL films. Its activity was maintained after loading in the CL films, and cellular viability could be reduced by about 55% over 3 days. Such a simple approach may be applied to other types of cross-linked films and to other drugs. These results prove that it is possible to design multifunctional multilayer films that combine mechanical resistance, biodegradability, and bioactivity properties into a single PEM architecture.

Adsorption↗

PubMedDate not supplied

Mass transfer and hydrocarbon biodegradation of aged soil in slurry phase.

Addition of toluene into slurry phase laboratory microcosm is proposed in order to increase desorption rate of hydrocarbons and as an alternative to improve bioavailability of hydrocarbon in aged soils. Our studies showed that toluene has a positive effect on desorption of total petroleum hydrocarbons (TPH). Addition of 14,000 mg toluene/kg of soil, in highly polluted soil, increased the consumption rate of hydrocarbons three times in comparison to control without solvent. In 30 days the initial TPH concentration in soil, 292,000 mg/kg, diminished 45%. Although toluene was able to dissolve complex organic compounds such as asphaltene fraction, it probably yielded a highly toxic toluene-hydrocarbons phase. The inhibitory effect of toluene-TPH was also studied. A substrate inhibition model was used: the k(m) and k(i) constants were 57 and 490 mg TPH/L liquid phase, respectively. Experimental data were well described when the proposed model included sequential desorption and biodegradation phenomena. Damköhler number evaluation showed that rate of mass transfer was the limiting step in overall biodegradation in nonsolvent control. When high concentration of toluene was added, then bioreaction was the limiting step, but inhibitory effect should be considered. However, toluene addition at low concentrations facilitates the biodegradation of aromatic compounds.

Adsorption↗

PubMed2001

Hydrogen and carbon isotope fractionation during aerobic biodegradation of benzene.

The main aim of the study was to evaluate hydrogen and carbon isotope fractionation during biodegradation of benzene as a possible tool to trace the process in contaminated environments. Aerobic biodegradation of benzene by two bacterial isolates, Acinetobacter sp. and Burkholderia sp., was accompanied by significant hydrogen and carbon isotope fractionation with hydrogen isotope enrichment factors of -12.8 +/- 0.7 per thousand and -11.2 +/- 1.8 per thousand, respectively, and average carbon isotope enrichment factors of -1.46 +/- 0.06 per thousand and -3.53 +/- 0.26 per thousand, respectively. Inorganic carbon produced by Acinetobacter sp. was depleted in 13C by 3.6-6.2 per thousand as compared to the initial delta13C of benzene, while the produced biomass was enriched in 13C by 3.8 per thousand. The secondary aim was to determine isotope ratios of benzenes from different manufacturers with regard to the use of isotopes for source differentiation. While two of the four analyzed benzenes had similar delta13C values, each of them had a distinct delta2H-delta13C pair and delta2H values spread over a range of 66.5 per thousand. Thus, combined analyses of hydrogen and carbon isotopes may be a more promising approach to trace sources and/or biodegradation of benzene than measuring carbon isotopes only.

Acinetobacter↗

PubMed2002

Catalysis of PAH biodegradation by humic acid shown in synchrotron infrared studies.

The role of humic acid (HA) in the biodegradation of toxic polycyclic aromatic hydrocarbons (PAHs) has been the subject of controversy, particularly in unsaturated environments. By utilizing an infrared spectromicroscope and a very bright, nondestructive synchrotron photon source, we monitored in situ and, over time, the influence of HA on the progression of degradation of pyrene (a model PAH) by a bacterial colony on a magnetite surface. Our results indicate that HA dramatically shortens the onset time for PAH biodegradation from 168 to 2 h. In the absence of HA, it takes the bacteria about 168 h to produce sufficient glycolipids to solubilize pyrene and make it bioavailable for biodegradation. These results will have large implications for the bioremediation of contaminated soils.

Bacteria↗

PubMed2003

Sorption kinetics and microbial biodegradation activity of hydrophobic chemicals in sewage sludge: model and measurements based on free concentrations.

In the current study, a new method is introduced with which the rate-limiting factor of biodegradation processes of hydrophobic chemicals in organic and aqueous systems can be determined. The novelty of this approach lies in the combination of a free concentration-based kinetic model with measurements of both free and total concentrations in time. This model includes microbial biodegradation activity of the chemical in the aqueous phase and chemical sorption kinetics with respect to organic carbon and aqueous phases. The time dependency of free and total concentrations of 7-acetyl-1,1,3,4,4,6-hexamethyltetrahydronaphthalene and 7-acetyl-1,1,3,4,4,6-hexahydro-4,6,6,7,8,8-hexamethylcyclopenta(g)-2-benzopyrane in activated sludge was experimentally determined in vitro. Evaporation losses from the test system were also determined. Least-squares regression to optimize the model parameters resulted in a model that is in accordance with the experimental data. Additionally, the model shows that a comparison between the decrease of free and total chemical concentrations in time, in combination with an independent measurement of the organic carbon/water partition coefficient provides information aboutthe rate-limiting step of the degradation process. This information can be used by sewage treatment plant managers to decide whether the microbial biodegradation activity itself or the desorption from organic carbon to the aqueous phase should be improved.

Biodegradation, Environmental↗

PubMed2003

Dissolved oxygen imaging in a porous medium to investigate biodegradation in a plume with limited electron acceptor supply.

A novel combination of noninvasive imaging with an oxygen sensitive fluorescent indicator was developed to investigate the biodegradation processes occurring at the fringe of a solute plume, where the supply of oxygen was limited. A thin transparent porous matrix (156 x 120 x 3 mm) was made from quartz plates and quartz sand (212-300 microm) and enriched with acetate-degrading bacteria. A degrading plume developed from a continuous acetate source in the uniform flow field containing dissolved oxygen. Ruthenium (II)-dichlorotris(1,10-phenanthroline) (Ru(phen)3Cl2), a water-soluble fluorescent dye, was used as an indicator of dissolved oxygen. The fluorescence intensity was dependent on the concentration of oxygen because the dissolved oxygen acted as collisional quencher. The oxygen distribution was interpreted from images recorded by a CCD camera. These two-dimensional experimental results showed quantitatively how the oxygen concentrations decreased strongly at the narrow plume fringe and that oxygen was depleted at the core of the plume. Separately, dispersivity was measured in a series of nonreactive transport experiments, and biodegradation parameters were evaluated by batch experiments. Two-dimensional numerical simulations with MT3D/RT3D used these parameters, and the predicted oxygen distributions were compared with the experimental results. This measurement method provides a novel approach to investigate details of solute transport and biodegradation in porous media.

Biodegradation, Environmental↗

PubMed2003

Biosurfactant- and biodegradation-enhanced partitioning of polycyclic aromatic hydrocarbons from nonaqueous-phase liquids.

A study was conducted on the effect of two different biological factors, microbial surfactants and biodegradation, on the kinetics of partitioning of polycyclic aromatic hydrocarbons (PAHs) from nonaqueous-phase liquids (NAPLs). The effect of rhamnolipid biosurfactants on partitioning into the aqueous phase of naphthalene, fluorene, phenanthrene, and pyrene, initially dissolved in di-2-ethylhexyl phthalate (DEHP) or 2,2,4,4,6,8,8-heptamethylnonane (HMN), was determined in multiple-solute experiments. Biosurfactants at a concentration above the CMC enhanced the partitioning rate of fluorene, phenanthrene, and pyrene but were ineffective with naphthalene. Enhancement of partitioning was also observed in the presence of suspended humic acid-clay complexes, which simulated the solids often present in the subsurface. Biosurfactants sorbed to the complexes modified PAH partitioning between the NAPL and these solids, increasing the fraction of solid-phase PAH. Biodegradation-driven partitioning was estimated in mineralization experiments with phenanthrene initially present in HMN and three representative soil bacterial strains, differing in their potential adherence to the NAPL. In the three cases, the rates of mineralization were very similar and significantly higher than the abiotic rate of partitioning. Our study suggests that in NAPL-polluted sites, partitioning of PAH may be efficiently enhanced by in situ treatments involving the use of biosurfactants and biodegradation.

Biodegradation, Environmental↗

PubMed2003

Shifts in biodegradation kinetics of the herbicides MCPP and 2,4-D at low concentrations in aerobic aquifer materials.

Biodegradation kinetics of two phenoxy acid herbicides, MCPP [(+/-)-2-(4-chloro-2-methylphenoxy)propanoic acid; mecoprop] and 2,4-D [2,4-dichlorophenoxyacetic acid] were studied in laboratory batch microcosms at low concentrations (0.025-100 microg/L) using 14C technique with sediments and groundwater from a shallow aerobic sandy aquifer. Below a certain threshold concentration of approximately 1 microg/L for 2,4-D and 10 microg/L for MCPP, the biodegradation followed first-order nongrowth kinetics, and no adaptation was observed within the experimental period of 341 d. Half-lifes for ultimate degradation were 500 d for 2,4-D and 1100 d for MCPP at 10 degrees C in unpolluted aquifer sediment in this environmentally relevant concentration regime. Above the threshold concentrations, the biodegradation rate accelerated gradually due to selective growth of specific biomass, which was ascertained from 14C most probable number enumerations of specific phenoxy acid degraders. Atthe highest concentration tested (100 microg/ L), specific degraders increased from 10(-1) to 10(5) cells/g during the experiment, and half-lifes after adaptation decreased to approximately 5 d. The enhanced rate of degradation by adapted systems was maintained during degradation of the last residuals measured to less than 0.1 microg/L. In situ long-term preexposure of the aquifer sediment also resulted in significant higher degradation rates of the phenoxy acids.

2,4-Dichlorophenoxyacetic Acid↗

PubMed2003

Phenol and catechol biodegradation by the haloalkaliphile Halomonas campisalis: influence of pH and salinity.

Removal of aromatic compounds from alkaline and/or saline industrial wastewater is an environmental concern for industry. In addition, aromatics may be accumulating in soda lakes, unique natural systems, where the fate and toxicity of these contaminants is unknown. To determine the feasibility of aromatic compound biodegradation in saline and alkaline conditions, the effect of pH and salinity on the biodegradation of phenol as a model aromatic waste compound by the haloalkaliphilic bacterium Halomonas campisalis was examined. Phenol was degraded as a source of carbon and energy at pH 8-11 and 0-150 g/L NaCl. Metabolic intermediates catechol, cis,cis-muconate, and (+)-muconolactone were identified, thus indicating that phenol was degraded via the beta-ketoadipate metabolic pathway. Although phenol and catechol were completely degraded in all cases, small amounts of cis,cis-muconate accumulated proportionally to increases in pH. There was no noticeable influence of salinity on cis,cis-muconate accumulation except at 0 g/L NaCl where it was completely degraded. These results indicate that it may be feasible to use haloalkaliphiles forthe treatment of aromatics present in saline and/or alkaline systems. This is the first report of phenol and catechol biodegradation under combined saline and alkaline conditions.

Biodegradation, Environmental↗

PubMed2004

Hydrogen and carbon isotope fractionation during anaerobic biodegradation of aromatic hydrocarbons--a field study.

The aquifer of a former manufactured gas plant site, highly contaminated by dissolved monocyclic, heterocyclic, and polycyclic aromatic hydrocarbons, was studied to evaluate the applicability of carbon and hydrogen isotope fractionation to prove ongoing biodegradation of these compounds even in complex aquifer settings. The loss of toluene, o-xylene, p,m-xylene, and 2-methylnaphthalene was accompanied by a considerable carbon isotope fractionation. Additionally, a strong 2H enrichment in residual o-xylene was detected. All isotope fractionations observed could be related to established biochemical degradation mechanisms, each involving a C-H bond cleavage in the rate-determining step. In contrast, other compounds such as 1-methylnaphthalene, methylbenzofuran, and acenaphthene exhibited a uniform stable carbon isotope composition. However, a decrease in concentration for these compounds was observed in the flowpath of the aquifer. High threshold concentrations of acenaphthene downgradient indicate that this contaminant is, if at all, only marginally biodegraded. Detailed analyses of xylenes provided support that compound specific isotope analyses and subsequent application of the Rayleigh model may provide a valuable basis to distinguish between different biodegradation mechanisms as well as dissolution processes in heterogeneous aquifers.

Bacteria, Anaerobic↗

PubMed2005

Column extraction of heavy metals from soils using the biodegradable chelating agent EDDS.

A possible remediation strategy for metal polluted soils is washing with chelants. Here, we compare the efficiency of batch and column extraction of Cu, Zn, and Pb from three soils using the biodegradable chelant EDDS. A total of 53-80% of Cu was extracted in batch and 18-26% in column extraction. For Zn, the extractability was 16-50% in batch and 20-64% in columns and for Pb 25-52 and 18-91%, respectively. Column leaching was therefore equally or better suited for Zn and Pb removal. The longer extraction time in the column resulted in more formations of Fe(III)EDDS by slow dissolution of iron oxides. Zn was uniformly washed from the column, while Cu and Pb were extracted in the top layers and deposited in the bottom layers, presumably by biodegradation of the metal-EDDS complexes and slow dissolution of iron oxides. Between 18 and 42% of the applied EDDS was lost through biodegradation after 7 weeks. In short time experiments, only 6% of EDDS was degraded. Using EDDS concentrations in excess of available heavy metals caused pronounced leaching of organic matter and clogging of the column. Our results prove that heap leaching using EDDS is a promising approach to reduce the heavy metal content of polluted soils.

Biodegradation, Environmental↗

PubMed2006

Biodegradability of 14C-labeled antibiotics in a modified laboratory scale sewage treatment plant at environmentally relevant concentrations.

For all new pharmaceuticals, an environmental risk assessment (ERA) has to be performed according to guidelines developed by the European Medicines Evaluation Agency. An important factor of this procedure is the assessment of the predicted environmental concentration in the aquatic environment, which is significantly influenced by the biodegradability of pharmaceuticals in sewage treatment plants. Established standardized methods for determining biodegradation under laboratory conditions apply to substance concentrations, which are much higherthan those expected in reality. Against this background, the laboratory scale sewage treatment plant (LSSTP), as described by the Organisation for Economic Cooperation and Development (OECD) Guideline No. 303A, was modified to construct a lossless system, which allows laboratory testing at realistic concentrations. To verify the experimental setup, the antibiotics benzylpenicillin, ceftriaxone, and trimethoprim were tested at low concentrations (microg/L) using 14C-labeled compounds. The results show that approximately 25% of benzylpenicillin was mineralized, whereas ceftriaxone and trimethoprim were not mineralized at all. Due to the high total recoveries of added radioactivity (> or =95%) and the fact that the findings comply with available literature data, the lossless operation of the test system could be proved. Consequently, the modified LSSTP is a suitable tool to determine more realistic biodegradation data required for the exposure assessment within the scope of an ERA for pharmaceuticals.

Anti-Bacterial Agents↗

PubMed2006

White-rot fungi demonstrate first biodegradation of phenolic resin.

Phenolic resins, phenol-formaldehyde polymers previously thought to be nonbiodegradable, are produced at an annual rate of 2.2 million metric tons in the United States for many industrial and commercial applications. Three independent lines of evidence established their biodegradability with the white-rot fungus Phanerochaete chrysosporium. Chromatic transformation of growth medium (yellow to pink) indicated initial biodegradation of the resin 3 days after inoculation. A degradation product, 13C-labeled phenol, was detected with gas chromatography-mass spectroscopy. Scanning electron micrographs revealed physical evidence of degradation. This is the first demonstrated biodegradation of these phenol-formaldehyde polymers and stands as a platform for investigation into bioremediation and biorecycling of phenolic resins.

Biodegradation, Environmental↗

PubMed2003

Biodegradation kinetics of endosulfan by Fusarium ventricosum and a Pandoraea species.

Endosulfan, classified as an organochlorine pesticide, is rated by the U.S. EPA as a Category 1 pesticide with extremely high acute toxicity. This study describes the biodegradation kinetics of endosulfan and the metabolic pathway utilized by Fusarium ventricosum and a Pandoraea sp. Complete disappearance of both alpha- and beta-endosulfan was observed during 12 days of incubation with F. ventricosum in flasks containing 100 mg L(-)(1) of endosulfan. The rate constants (k) for biodegradation of alpha- and beta-endosulfan by F. ventricosum using zero-order kinetics were 14.22 and 6.60 mg L(-)(1) day(-)(1), respectively. The Pandoraea sp. degraded about 95 and 100% of alpha- and beta-endosulfan, respectively, in 18 days of incubation in flasks spiked with 100 mg L(-)(1) of endosulfan. The rate constants (k) for biodegradation of alpha- and beta-endosulfan by the Pandoraea sp. were 8.19 and 3.78 mg L(-)(1) day(-)(1), respectively. Both fungal and bacterial strains formed less toxic endosulfan diol and endosulfan ether as metabolites during metabolism of endosulfan. The results of this study suggest that these novel strains may be used for the bioremediation of endosulfan-contaminated sites.

Biodegradation, Environmental↗

PubMed1999

Biodegradation of aromatic compounds and TCE by a filamentous bacteria-dominated consortium.

The Michaelis-Menten biodegradation kinetics (k and Ks) of aromatic compounds and trichloroethene (TCE) by an aerobic enrichment culture grown on phenol and dominated by a unique filamentous bacterium were measured. The average k and Ks values for phenol, benzene (B), toluene (T), ethylbenzene (E), o-xylene (oX), p-xylene (pX), naphthalene and TCE in g per g VSS-d and mg L-1 were 5.72 and 0.34, 1.20 and 0.51, 2.09 and 0.47, 0.77 and 0.23, 0.61 and 0.16, 0.73 and 0.23, 0.17 and 0.18, and 0.16 and 0.18, respectively. Significant variability in these measured kinetics was noted between tests conducted over the 5-month period during which the fed-batch culture with a 5-day solids retention time was maintained; the coefficient of variation of the k and Ks values ranged from 11-43% and 4-50%, respectively. This variation was significantly greater than the method measurement error on a given date. Degradation of BTEoXpX mixtures could be described by a basic competitive inhibition model. Batch tests during which the culture was fed individual BTEX compounds showed the culture grew poorly on the xylenes and had poor subsequent xylene degradation rates. This work indicates the potential to simultaneously treat a mixture of volatile organic compounds using this consortium, and the ability to predict the mixture biodegradation rates on the basis of the individual compound biodegradation kinetics.

Algorithms↗

PubMed2001

Detection of intermediate metabolites of benzene biodegradation under microaerophilic conditions.

The intermediate metabolites of benzene transformation by a microaerophilic bacterial consortium, adapted to degrade gasoline and benzene at low concentrations of dissolved oxygen (<1 mg l(-1)), were identified. The examined range of initial DO concentration, 0.05 to 1 mg l(-1), was considerably lower than the previously reported values believed to be necessary to initiate benzene biodegradation. An extensive transformation of benzene. higher than the theoretical predictions for its aerobic oxidation, was observed. Phenol was identified as the most stable and the major intermediate metabolite which was subsequently transformed into catechol and benzoate. The use of 13C-labeled compounds identified benzene as the source of phenol, and phenol as the source of catechol and benzoate, suggesting the involvement of a monooxygenase enzymatic system in biodegradation of benzene at low DO concentrations. A metabolic sequence was proposed to describe the simultaneous detection of catechol and benzoate during the microaerophilic transformation of benzene. The results of this work demonstrate that it is possible to transform benzene, a highly carcinogenic hydrocarbon and a major contaminant of groundwater, to more easily biodegradable compounds in the presence of very small amounts of oxygen.

Aerobiosis↗

PubMed2003

Slow complexation kinetics for ferric iron and EDTA complexes make EDTA non-biodegradable.

Published experimental data on ethylenediaminetetraacetic acid (EDTA) biodegradation in the presence of ferric iron (Fe(III)) showed that rapid biodegradation of EDTA suddenly stopped, leaving a residual of unbiodegraded EDTA that was equal to the concentration of dissolved Fe(III). We hypothesize that slow kinetics for the dissociation of two iron-EDTA complexes--FeEDTA(-) and FeOHEDTA(2-)--sequestered the EDTA in a form that is biologically unavailable. To evaluate this hypothesis, we added to the biogeochemical model CCBATCH a new submodel for kinetically controlled complexation. CCBATCH simulations with kinetically controlled complexation for FeEDTA(-) and FeOHEDTA(2-) and the observed concentration of total dissolved Fe(III) accurately predicted the sudden cessation of EDTA biodegradation at the exact time shown experimentally. Our simulations also correctly predicted the observed residual EDTA concentration and the amounts of biomass and NH4+. Alternate explanations for the experimental results--strong equilibrium complexation of ferric iron and EDTA and precipitation of calcium and magnesium solids--could not capture the observed trends. This analysis using CCBATCH's new sub-model for kinetically controlled complexation shows that EDTA, once it becomes complexed with Fe(III), becomes biologically unavailable.

Algorithms↗